Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 C8orf49-201ENST00000525043 1968 ntBASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 PHGDH-209ENST00000641074 1780 ntBASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 RNF216P1-203ENST00000404404 2427 ntBASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 AC132938.6-201ENST00000623828 1655 ntBASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
SCAF1Q9H7N4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AC097493.3-201ENST00000509725 367 ntBASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AL158211.3-201ENST00000607385 239 ntBASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 Six3os1_5.1-201ENST00000611000 271 ntBASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AC068587.10-201ENST00000641210 219 ntBASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 AL365203.3-201ENST00000609742 2057 ntBASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SCAF1Q9H7N4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 AC002056.1-201ENST00000395613 760 ntBASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 AC117500.1-201ENST00000497352 755 ntBASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 AC079140.1-201ENST00000508039 487 ntBASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 AC069120.2-201ENST00000524091 540 ntBASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 AC009118.2-201ENST00000613275 655 ntBASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 AC073578.4-201ENST00000623945 514 ntBASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC24.39■■□□□ 1.5
SCAF1Q9H7N4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC24.39■■□□□ 1.49
SCAF1Q9H7N4 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCAF1Q9H7N4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCAF1Q9H7N4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SCAF1Q9H7N4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SCAF1Q9H7N4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
SCAF1Q9H7N4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SCAF1Q9H7N4 KRT18P55-202ENST00000578578 1546 ntBASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 AC013410.2-201ENST00000422627 201 ntBASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 AC109809.1-201ENST00000619665 545 ntBASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 AL353593.2-201ENST00000602529 1483 ntBASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 AC093010.1-201ENST00000473625 1624 ntBASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC24.38■■□□□ 1.49
SCAF1Q9H7N4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SCAF1Q9H7N4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC24.37■■□□□ 1.49
SCAF1Q9H7N4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms