Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.29□□□□□ -0.12
SLIRPQ9GZT3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 MBLAC2-202ENST00000514906 1936 ntBASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 AL590787.1-201ENST00000568856 1315 ntBASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 Z83836.1-201ENST00000624605 1642 ntBASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 AC141257.4-201ENST00000634557 245 ntBASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 AC136944.6-201ENST00000634818 245 ntBASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SLIRPQ9GZT3 AC067930.6-201ENST00000623257 4947 ntBASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 CYP2D8P-201ENST00000433633 1490 ntBASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.27□□□□□ -0.12
SLIRPQ9GZT3 HAUS4P1-201ENST00000406739 1145 ntBASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 AL845331.1-201ENST00000424978 1190 ntBASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 Z99916.2-201ENST00000604037 246 ntBASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
SLIRPQ9GZT3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 PMPCAP1-201ENST00000508114 1576 ntBASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLIRPQ9GZT3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms