Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 AL365203.3-201ENST00000609742 2057 ntBASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 AC092474.2-201ENST00000424288 719 ntBASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 AL603832.2-201ENST00000566195 2125 ntBASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
YIPF4Q9BSR8 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 AC063926.3-201ENST00000624734 5658 ntBASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 AC023274.1-201ENST00000418278 595 ntBASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 AC004967.1-201ENST00000453589 447 ntBASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 AC074386.1-202ENST00000463561 864 ntBASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 KRT18P34-201ENST00000488218 1270 ntBASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 AC109635.5-201ENST00000533593 962 ntBASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
YIPF4Q9BSR8 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.31■□□□□ 0.04
YIPF4Q9BSR8 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms