Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14□□□□□ -0.17
CMTM3Q96MX0 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CMTM3Q96MX0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CMTM3Q96MX0 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.99□□□□□ -0.17
CMTM3Q96MX0 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 AK4P3-201ENST00000418260 669 ntBASIC13.99□□□□□ -0.17
CMTM3Q96MX0 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 AC064862.7-201ENST00000604520 867 ntBASIC13.99□□□□□ -0.17
CMTM3Q96MX0 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.99□□□□□ -0.17
CMTM3Q96MX0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 C18orf15-201ENST00000623680 2534 ntBASIC13.99□□□□□ -0.17
CMTM3Q96MX0 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.99□□□□□ -0.17
CMTM3Q96MX0 AGAP7P-201ENST00000582299 2062 ntBASIC13.99□□□□□ -0.17
CMTM3Q96MX0 AGAP14-201ENST00000624701 2060 ntBASIC13.99□□□□□ -0.17
CMTM3Q96MX0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 KRT8P44-201ENST00000441609 1350 ntBASIC13.98□□□□□ -0.17
CMTM3Q96MX0 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 AL671277.2-201ENST00000458060 996 ntBASIC13.98□□□□□ -0.17
CMTM3Q96MX0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 AL121672.3-201ENST00000608644 468 ntBASIC13.98□□□□□ -0.17
CMTM3Q96MX0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 AL022326.1-202ENST00000641533 845 ntBASIC13.98□□□□□ -0.17
CMTM3Q96MX0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CMTM3Q96MX0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CMTM3Q96MX0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CMTM3Q96MX0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms