Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 AC080080.1-201ENST00000625121 2420 ntBASIC21.13■□□□□ 0.97
NBPF4Q96M43 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC21.13■□□□□ 0.97
NBPF4Q96M43 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NBPF4Q96M43 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 AC022211.2-201ENST00000585075 2527 ntBASIC21.12■□□□□ 0.97
NBPF4Q96M43 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 BOLA2P3-201ENST00000404566 256 ntBASIC21.12■□□□□ 0.97
NBPF4Q96M43 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 RPS24-214ENST00000613865 538 ntTSL 5 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.12■□□□□ 0.97
NBPF4Q96M43 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 AC134407.2-201ENST00000625089 1978 ntBASIC21.12■□□□□ 0.97
NBPF4Q96M43 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NBPF4Q96M43 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 FLJ38576-201ENST00000623820 2459 ntBASIC21.11■□□□□ 0.97
NBPF4Q96M43 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 MPV17-208ENST00000405076 603 ntTSL 5 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 AL162726.2-201ENST00000438986 1017 ntBASIC21.11■□□□□ 0.97
NBPF4Q96M43 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 AC124283.3-201ENST00000570869 594 ntBASIC21.11■□□□□ 0.97
NBPF4Q96M43 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC21.11■□□□□ 0.97
NBPF4Q96M43 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NBPF4Q96M43 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
NBPF4Q96M43 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 FAM86MP-201ENST00000340703 885 ntBASIC21.1■□□□□ 0.97
NBPF4Q96M43 PKIG-203ENST00000372887 769 ntTSL 3 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 TDH-203ENST00000531764 1110 ntBASIC21.1■□□□□ 0.97
NBPF4Q96M43 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.1■□□□□ 0.97
NBPF4Q96M43 ME2P1-201ENST00000426028 1970 ntBASIC21.1■□□□□ 0.97
NBPF4Q96M43 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NBPF4Q96M43 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms