Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAM1L1Q8N609 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 AC097493.3-201ENST00000509725 367 ntBASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 AL138828.2-201ENST00000615812 383 ntBASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAM1L1Q8N609 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AC092580.3-201ENST00000430932 139 ntBASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AC055876.3-201ENST00000431496 288 ntBASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AC027369.6-201ENST00000525520 931 ntBASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 AC138649.4-201ENST00000612222 287 ntBASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAM1L1Q8N609 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms