Protein–RNA interactions for Protein: Q8N1F7

NUP93, Nuclear pore complex protein Nup93, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93Q8N1F7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP93Q8N1F7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP93Q8N1F7 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.09■□□□□ 0.33
NUP93Q8N1F7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NUP93Q8N1F7 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NUP93Q8N1F7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NUP93Q8N1F7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NUP93Q8N1F7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NUP93Q8N1F7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NUP93Q8N1F7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NUP93Q8N1F7 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.33
NUP93Q8N1F7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUP93Q8N1F7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NUP93Q8N1F7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 AL592424.1-201ENST00000563624 1536 ntBASIC17.08■□□□□ 0.32
NUP93Q8N1F7 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 AL512638.1-201ENST00000457493 794 ntBASIC17.08■□□□□ 0.32
NUP93Q8N1F7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 MIR4321-201ENST00000592276 80 ntBASIC17.08■□□□□ 0.32
NUP93Q8N1F7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 AC026979.3-201ENST00000607315 403 ntBASIC17.08■□□□□ 0.32
NUP93Q8N1F7 AL589739.1-201ENST00000607720 493 ntBASIC17.08■□□□□ 0.32
NUP93Q8N1F7 AL590560.3-201ENST00000623350 461 ntBASIC17.08■□□□□ 0.32
NUP93Q8N1F7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 AC005052.1-201ENST00000625181 2492 ntBASIC17.08■□□□□ 0.32
NUP93Q8N1F7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.08■□□□□ 0.32
NUP93Q8N1F7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 AC100757.3-201ENST00000622361 1406 ntBASIC17.07■□□□□ 0.32
NUP93Q8N1F7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.07■□□□□ 0.32
NUP93Q8N1F7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NUP93Q8N1F7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NUP93Q8N1F7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms