Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 RNA5SP421-201ENST00000516864 134 ntBASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 AL079307.3-201ENST00000556114 283 ntBASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
LRRTM4Q86VH4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 AL662844.4-201ENST00000606367 2838 ntBASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 AC241585.1-201ENST00000433527 519 ntBASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRTM4Q86VH4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.87■□□□□ 0.13
LRRTM4Q86VH4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms