Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.22■□□□□ 0.19
LDB1Q86U70 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.22■□□□□ 0.19
LDB1Q86U70 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.22■□□□□ 0.19
LDB1Q86U70 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.22■□□□□ 0.19
LDB1Q86U70 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.22■□□□□ 0.19
LDB1Q86U70 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LDB1Q86U70 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.22■□□□□ 0.19
LDB1Q86U70 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.22■□□□□ 0.19
LDB1Q86U70 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.22■□□□□ 0.19
LDB1Q86U70 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LDB1Q86U70 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LDB1Q86U70 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
LDB1Q86U70 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.22■□□□□ 0.19
LDB1Q86U70 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
LDB1Q86U70 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.21■□□□□ 0.19
LDB1Q86U70 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LDB1Q86U70 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LDB1Q86U70 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.21■□□□□ 0.19
LDB1Q86U70 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LDB1Q86U70 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.21■□□□□ 0.19
LDB1Q86U70 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.21■□□□□ 0.19
LDB1Q86U70 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.21■□□□□ 0.19
LDB1Q86U70 AC243562.1-201ENST00000560672 389 ntBASIC16.21■□□□□ 0.19
LDB1Q86U70 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.21■□□□□ 0.19
LDB1Q86U70 AC027307.2-201ENST00000591252 911 ntBASIC16.21■□□□□ 0.19
LDB1Q86U70 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
LDB1Q86U70 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.21■□□□□ 0.19
LDB1Q86U70 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
LDB1Q86U70 C20orf181-201ENST00000623918 480 ntBASIC16.21■□□□□ 0.19
LDB1Q86U70 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.21■□□□□ 0.19
LDB1Q86U70 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.21■□□□□ 0.19
LDB1Q86U70 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LDB1Q86U70 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.21■□□□□ 0.19
LDB1Q86U70 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
LDB1Q86U70 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.21■□□□□ 0.19
LDB1Q86U70 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LDB1Q86U70 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
LDB1Q86U70 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LDB1Q86U70 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.21■□□□□ 0.18
LDB1Q86U70 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
LDB1Q86U70 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB1Q86U70 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.2■□□□□ 0.18
LDB1Q86U70 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB1Q86U70 AL139384.1-201ENST00000612143 3047 ntBASIC16.2■□□□□ 0.18
LDB1Q86U70 AL162727.3-201ENST00000635661 2787 ntBASIC16.2■□□□□ 0.18
LDB1Q86U70 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.2■□□□□ 0.18
LDB1Q86U70 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB1Q86U70 HTR5BP-201ENST00000430851 1154 ntBASIC16.2■□□□□ 0.18
LDB1Q86U70 TIMM8BP1-201ENST00000452384 211 ntBASIC16.2■□□□□ 0.18
LDB1Q86U70 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB1Q86U70 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.2■□□□□ 0.18
LDB1Q86U70 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.2■□□□□ 0.18
LDB1Q86U70 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.2■□□□□ 0.18
LDB1Q86U70 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.2■□□□□ 0.18
LDB1Q86U70 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB1Q86U70 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.2■□□□□ 0.18
LDB1Q86U70 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.2■□□□□ 0.18
LDB1Q86U70 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.2■□□□□ 0.18
LDB1Q86U70 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
LDB1Q86U70 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.2■□□□□ 0.18
LDB1Q86U70 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
LDB1Q86U70 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.2■□□□□ 0.18
LDB1Q86U70 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
LDB1Q86U70 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.2■□□□□ 0.18
LDB1Q86U70 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LDB1Q86U70 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms