Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 AL022326.1-202ENST00000641533 845 ntBASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 CDC14C-201ENST00000428251 1719 ntBASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 AL353593.2-201ENST00000602529 1483 ntBASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 AC148477.5-201ENST00000625164 1645 ntBASIC15.65■□□□□ 0.1
PPP4R4Q6NUP7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
PPP4R4Q6NUP7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
PPP4R4Q6NUP7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 AL021920.2-201ENST00000624828 1351 ntBASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 SPDYE21P-201ENST00000413323 827 ntBASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 SLC25A6P4-201ENST00000586535 553 ntBASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 AC013467.2-201ENST00000605472 835 ntBASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
PPP4R4Q6NUP7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 LINC02447-202ENST00000501888 2146 ntBASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 AC120114.3-201ENST00000611923 658 ntBASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PPP4R4Q6NUP7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms