Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 AC243562.2-201ENST00000561247 970 ntBASIC16.82■□□□□ 0.28
LRRC38Q5VT99 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 AC027307.2-201ENST00000591252 911 ntBASIC16.82■□□□□ 0.28
LRRC38Q5VT99 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 AC092902.6-201ENST00000641783 218 ntBASIC16.82■□□□□ 0.28
LRRC38Q5VT99 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 AC134407.2-201ENST00000625089 1978 ntBASIC16.82■□□□□ 0.28
LRRC38Q5VT99 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 AC020658.6-201ENST00000623564 1870 ntBASIC16.82■□□□□ 0.28
LRRC38Q5VT99 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC38Q5VT99 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 AL691432.1-201ENST00000596308 1422 ntBASIC16.81■□□□□ 0.28
LRRC38Q5VT99 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 AL121894.2-201ENST00000602977 491 ntBASIC16.81■□□□□ 0.28
LRRC38Q5VT99 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC38Q5VT99 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 MIR346-201ENST00000362234 95 ntBASIC16.8■□□□□ 0.28
LRRC38Q5VT99 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 FAM220BP-201ENST00000377689 816 ntBASIC16.8■□□□□ 0.28
LRRC38Q5VT99 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 MCCD1P2-201ENST00000423228 335 ntBASIC16.8■□□□□ 0.28
LRRC38Q5VT99 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC38Q5VT99 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC38Q5VT99 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms