Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.66■□□□□ 0.26
ALFQ53S48 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ALFQ53S48 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.66■□□□□ 0.26
ALFQ53S48 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ALFQ53S48 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.66■□□□□ 0.26
ALFQ53S48 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 AC107890.1-201ENST00000422478 521 ntBASIC16.66■□□□□ 0.26
ALFQ53S48 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.66■□□□□ 0.26
ALFQ53S48 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ALFQ53S48 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.66■□□□□ 0.26
ALFQ53S48 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.66■□□□□ 0.26
ALFQ53S48 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.66■□□□□ 0.26
ALFQ53S48 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.66■□□□□ 0.26
ALFQ53S48 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.66■□□□□ 0.26
ALFQ53S48 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.66■□□□□ 0.26
ALFQ53S48 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.66■□□□□ 0.26
ALFQ53S48 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.66■□□□□ 0.26
ALFQ53S48 MTHFR-217ENST00000641820 1569 ntBASIC16.66■□□□□ 0.26
ALFQ53S48 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
ALFQ53S48 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ALFQ53S48 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.66■□□□□ 0.26
ALFQ53S48 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.66■□□□□ 0.26
ALFQ53S48 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.66■□□□□ 0.26
ALFQ53S48 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.66■□□□□ 0.26
ALFQ53S48 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ALFQ53S48 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ALFQ53S48 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.65■□□□□ 0.26
ALFQ53S48 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.65■□□□□ 0.26
ALFQ53S48 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.65■□□□□ 0.26
ALFQ53S48 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.65■□□□□ 0.26
ALFQ53S48 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.65■□□□□ 0.26
ALFQ53S48 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.65■□□□□ 0.26
ALFQ53S48 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.65■□□□□ 0.26
ALFQ53S48 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.65■□□□□ 0.26
ALFQ53S48 AC140878.1-201ENST00000565277 250 ntBASIC16.65■□□□□ 0.26
ALFQ53S48 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
ALFQ53S48 AL390955.2-201ENST00000603032 514 ntBASIC16.65■□□□□ 0.26
ALFQ53S48 RN7SL828P-201ENST00000607615 303 ntBASIC16.65■□□□□ 0.26
ALFQ53S48 AL133215.2-201ENST00000609242 977 ntBASIC16.65■□□□□ 0.26
ALFQ53S48 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ALFQ53S48 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ALFQ53S48 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.65■□□□□ 0.26
ALFQ53S48 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ALFQ53S48 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.65■□□□□ 0.26
ALFQ53S48 AL136982.4-201ENST00000437689 1740 ntBASIC16.65■□□□□ 0.26
ALFQ53S48 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ALFQ53S48 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
ALFQ53S48 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.64■□□□□ 0.25
ALFQ53S48 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.64■□□□□ 0.25
ALFQ53S48 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ALFQ53S48 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ALFQ53S48 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ALFQ53S48 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ALFQ53S48 MIR943-201ENST00000401286 94 ntBASIC16.64■□□□□ 0.25
ALFQ53S48 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms