Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC134407.2-201ENST00000625089 1978 ntBASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 AC132872.4-202ENST00000622924 2756 ntBASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PTPN20Q4JDL3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 PAUPAR-201ENST00000630360 2965 ntBASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PTPN20Q4JDL3 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 AC026150.2-201ENST00000564693 1156 ntBASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 AL136982.4-201ENST00000437689 1740 ntBASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 AP001282.1-201ENST00000531301 1499 ntBASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 CROCCP1-201ENST00000426910 5675 ntBASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PTPN20Q4JDL3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.02■□□□□ 0.32
PTPN20Q4JDL3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms