Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 SPDYE17-201ENST00000412399 783 ntBASIC18.56■□□□□ 0.56
USH1GQ495M9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.56■□□□□ 0.56
USH1GQ495M9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.56■□□□□ 0.56
USH1GQ495M9 SERBP1P3-201ENST00000459980 809 ntBASIC18.56■□□□□ 0.56
USH1GQ495M9 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.56■□□□□ 0.56
USH1GQ495M9 AC135586.1-201ENST00000539323 574 ntBASIC18.56■□□□□ 0.56
USH1GQ495M9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.56■□□□□ 0.56
USH1GQ495M9 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
USH1GQ495M9 AC004233.3-201ENST00000607794 1269 ntBASIC18.56■□□□□ 0.56
USH1GQ495M9 AL033527.5-202ENST00000641632 1098 ntBASIC18.56■□□□□ 0.56
USH1GQ495M9 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.56■□□□□ 0.56
USH1GQ495M9 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
USH1GQ495M9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
USH1GQ495M9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
USH1GQ495M9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.55■□□□□ 0.56
USH1GQ495M9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.55■□□□□ 0.56
USH1GQ495M9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
USH1GQ495M9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.55■□□□□ 0.56
USH1GQ495M9 PCDH8P1-201ENST00000428983 2773 ntBASIC18.55■□□□□ 0.56
USH1GQ495M9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.55■□□□□ 0.56
USH1GQ495M9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.55■□□□□ 0.56
USH1GQ495M9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
USH1GQ495M9 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
USH1GQ495M9 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.55■□□□□ 0.56
USH1GQ495M9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.55■□□□□ 0.56
USH1GQ495M9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.55■□□□□ 0.56
USH1GQ495M9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
USH1GQ495M9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.55■□□□□ 0.56
USH1GQ495M9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.55■□□□□ 0.56
USH1GQ495M9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.55■□□□□ 0.56
USH1GQ495M9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.55■□□□□ 0.56
USH1GQ495M9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.55■□□□□ 0.56
USH1GQ495M9 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.55■□□□□ 0.56
USH1GQ495M9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USH1GQ495M9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.55■□□□□ 0.56
USH1GQ495M9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USH1GQ495M9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
USH1GQ495M9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
USH1GQ495M9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
USH1GQ495M9 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
USH1GQ495M9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.54■□□□□ 0.56
USH1GQ495M9 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.54■□□□□ 0.56
USH1GQ495M9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.54■□□□□ 0.56
USH1GQ495M9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.54■□□□□ 0.56
USH1GQ495M9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
USH1GQ495M9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 AC015922.1-201ENST00000421102 1152 ntBASIC18.54■□□□□ 0.56
USH1GQ495M9 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.54■□□□□ 0.56
USH1GQ495M9 SPTLC1P1-201ENST00000447199 261 ntBASIC18.54■□□□□ 0.56
USH1GQ495M9 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.54■□□□□ 0.56
USH1GQ495M9 AC190387.1-201ENST00000551683 408 ntBASIC18.54■□□□□ 0.56
USH1GQ495M9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.54■□□□□ 0.56
USH1GQ495M9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.54■□□□□ 0.56
USH1GQ495M9 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USH1GQ495M9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.54■□□□□ 0.56
USH1GQ495M9 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.54■□□□□ 0.56
USH1GQ495M9 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.54■□□□□ 0.56
USH1GQ495M9 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
USH1GQ495M9 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms