Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.02□□□□□ -0.17
ACTBP60709 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.02□□□□□ -0.17
ACTBP60709 MIR5100-201ENST00000579544 119 ntBASIC14.02□□□□□ -0.17
ACTBP60709 AC091167.2-201ENST00000579581 588 ntBASIC14.02□□□□□ -0.17
ACTBP60709 MIR4492-201ENST00000581627 80 ntBASIC14.02□□□□□ -0.17
ACTBP60709 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.02□□□□□ -0.17
ACTBP60709 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.02□□□□□ -0.17
ACTBP60709 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.02□□□□□ -0.17
ACTBP60709 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.02□□□□□ -0.17
ACTBP60709 PGM5P2-202ENST00000637225 1043 ntBASIC14.02□□□□□ -0.17
ACTBP60709 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.02□□□□□ -0.17
ACTBP60709 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ACTBP60709 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
ACTBP60709 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 AL009178.2-201ENST00000597278 2719 ntBASIC14.02□□□□□ -0.17
ACTBP60709 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 AL109954.1-202ENST00000564051 2148 ntBASIC14.02□□□□□ -0.17
ACTBP60709 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.02□□□□□ -0.17
ACTBP60709 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.02□□□□□ -0.17
ACTBP60709 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
ACTBP60709 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTBP60709 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 SIGLEC16-201ENST00000599858 1437 ntBASIC14.01□□□□□ -0.17
ACTBP60709 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ACTBP60709 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 KRT16P4-201ENST00000453883 522 ntBASIC14.01□□□□□ -0.17
ACTBP60709 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC14.01□□□□□ -0.17
ACTBP60709 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.01□□□□□ -0.17
ACTBP60709 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.01□□□□□ -0.17
ACTBP60709 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.01□□□□□ -0.17
ACTBP60709 AL591684.3-201ENST00000605187 298 ntBASIC14.01□□□□□ -0.17
ACTBP60709 AC020765.3-201ENST00000613051 740 ntBASIC14.01□□□□□ -0.17
ACTBP60709 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.01□□□□□ -0.17
ACTBP60709 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ACTBP60709 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTBP60709 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.01□□□□□ -0.17
ACTBP60709 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14□□□□□ -0.17
ACTBP60709 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTBP60709 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ACTBP60709 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14□□□□□ -0.17
ACTBP60709 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTBP60709 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14□□□□□ -0.17
ACTBP60709 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14□□□□□ -0.17
ACTBP60709 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTBP60709 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
ACTBP60709 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTBP60709 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
ACTBP60709 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTBP60709 AL590787.1-201ENST00000568856 1315 ntBASIC14□□□□□ -0.17
ACTBP60709 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ACTBP60709 AC136621.1-201ENST00000624017 2304 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms