Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
NCKAP1LP55160 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NCKAP1LP55160 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NCKAP1LP55160 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NCKAP1LP55160 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NCKAP1LP55160 LINC02447-202ENST00000501888 2146 ntBASIC17.71■□□□□ 0.42
NCKAP1LP55160 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
NCKAP1LP55160 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NCKAP1LP55160 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NCKAP1LP55160 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 CETN4P-206ENST00000642099 2168 ntBASIC17.7■□□□□ 0.42
NCKAP1LP55160 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 AL080243.2-201ENST00000418783 582 ntBASIC17.7■□□□□ 0.42
NCKAP1LP55160 TREML5P-201ENST00000421694 576 ntBASIC17.7■□□□□ 0.42
NCKAP1LP55160 AC092580.3-201ENST00000430932 139 ntBASIC17.7■□□□□ 0.42
NCKAP1LP55160 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 CYMP-203ENST00000474680 1263 ntBASIC17.7■□□□□ 0.42
NCKAP1LP55160 HLA-V-204ENST00000476601 1289 ntBASIC17.7■□□□□ 0.42
NCKAP1LP55160 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 AC027796.2-201ENST00000575326 344 ntBASIC17.7■□□□□ 0.42
NCKAP1LP55160 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 AL589739.1-201ENST00000607720 493 ntBASIC17.7■□□□□ 0.42
NCKAP1LP55160 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 AC093512.1-201ENST00000617969 520 ntBASIC17.7■□□□□ 0.42
NCKAP1LP55160 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.7■□□□□ 0.42
NCKAP1LP55160 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NCKAP1LP55160 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 FO538757.1-201ENST00000623083 1397 ntBASIC17.69■□□□□ 0.42
NCKAP1LP55160 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.69■□□□□ 0.42
NCKAP1LP55160 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 AL138828.2-201ENST00000615812 383 ntBASIC17.69■□□□□ 0.42
NCKAP1LP55160 AC073592.8-201ENST00000624126 511 ntBASIC17.69■□□□□ 0.42
NCKAP1LP55160 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 AC112504.1-201ENST00000623415 1841 ntBASIC17.69■□□□□ 0.42
NCKAP1LP55160 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.69■□□□□ 0.42
NCKAP1LP55160 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKAP1LP55160 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 KRT8P12-202ENST00000472924 1397 ntBASIC17.68■□□□□ 0.42
NCKAP1LP55160 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NCKAP1LP55160 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 MIR943-201ENST00000401286 94 ntBASIC17.68■□□□□ 0.42
NCKAP1LP55160 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 RPL37AP1-201ENST00000412502 279 ntBASIC17.68■□□□□ 0.42
NCKAP1LP55160 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
NCKAP1LP55160 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.68■□□□□ 0.42
NCKAP1LP55160 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.68■□□□□ 0.42
NCKAP1LP55160 AC097493.3-201ENST00000509725 367 ntBASIC17.68■□□□□ 0.42
NCKAP1LP55160 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.68■□□□□ 0.42
NCKAP1LP55160 AL390955.2-201ENST00000603032 514 ntBASIC17.68■□□□□ 0.42
NCKAP1LP55160 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 AC011477.6-201ENST00000604980 1927 ntBASIC17.68■□□□□ 0.42
NCKAP1LP55160 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKAP1LP55160 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms