Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL079307.3-201ENST00000556114 283 ntBASIC15.75■□□□□ 0.11
PDX1P52945 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.75■□□□□ 0.11
PDX1P52945 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.75■□□□□ 0.11
PDX1P52945 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.75■□□□□ 0.11
PDX1P52945 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.75■□□□□ 0.11
PDX1P52945 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.75■□□□□ 0.11
PDX1P52945 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
PDX1P52945 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PDX1P52945 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
PDX1P52945 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.75■□□□□ 0.11
PDX1P52945 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDX1P52945 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.75■□□□□ 0.11
PDX1P52945 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.74■□□□□ 0.11
PDX1P52945 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PDX1P52945 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
PDX1P52945 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.74■□□□□ 0.11
PDX1P52945 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.74■□□□□ 0.11
PDX1P52945 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.74■□□□□ 0.11
PDX1P52945 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PDX1P52945 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
PDX1P52945 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 AC007541.1-201ENST00000570282 1469 ntBASIC15.74■□□□□ 0.11
PDX1P52945 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 PCDHB19P-201ENST00000570871 2371 ntBASIC15.74■□□□□ 0.11
PDX1P52945 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
PDX1P52945 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
PDX1P52945 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.74■□□□□ 0.11
PDX1P52945 U91328.1-201ENST00000437528 223 ntBASIC15.74■□□□□ 0.11
PDX1P52945 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.74■□□□□ 0.11
PDX1P52945 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.74■□□□□ 0.11
PDX1P52945 AP002490.2-201ENST00000524791 560 ntBASIC15.74■□□□□ 0.11
PDX1P52945 ZNF890P-202ENST00000530367 1156 ntBASIC15.74■□□□□ 0.11
PDX1P52945 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.74■□□□□ 0.11
PDX1P52945 AC104794.3-201ENST00000566840 1248 ntBASIC15.74■□□□□ 0.11
PDX1P52945 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.74■□□□□ 0.11
PDX1P52945 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.74■□□□□ 0.11
PDX1P52945 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.74■□□□□ 0.11
PDX1P52945 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.74■□□□□ 0.11
PDX1P52945 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PDX1P52945 AL391256.1-201ENST00000443260 1855 ntBASIC15.74■□□□□ 0.11
PDX1P52945 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PDX1P52945 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PDX1P52945 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
PDX1P52945 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PDX1P52945 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PDX1P52945 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.73■□□□□ 0.11
PDX1P52945 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.73■□□□□ 0.11
PDX1P52945 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.73■□□□□ 0.11
PDX1P52945 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.73■□□□□ 0.11
PDX1P52945 AC140912.1-201ENST00000577171 1054 ntBASIC15.73■□□□□ 0.11
PDX1P52945 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.73■□□□□ 0.11
PDX1P52945 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.73■□□□□ 0.11
PDX1P52945 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.73■□□□□ 0.11
PDX1P52945 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 KRT8P39-201ENST00000396270 1433 ntBASIC15.73■□□□□ 0.11
PDX1P52945 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
PDX1P52945 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.73■□□□□ 0.11
PDX1P52945 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.73■□□□□ 0.11
PDX1P52945 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PDX1P52945 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.73■□□□□ 0.11
PDX1P52945 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PDX1P52945 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms