Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HCFC1P51610 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
HCFC1P51610 TNRC18P3-201ENST00000441896 2691 ntBASIC14.04□□□□□ -0.16
HCFC1P51610 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.04□□□□□ -0.16
HCFC1P51610 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HCFC1P51610 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HCFC1P51610 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.03□□□□□ -0.16
HCFC1P51610 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.03□□□□□ -0.16
HCFC1P51610 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.03□□□□□ -0.16
HCFC1P51610 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.03□□□□□ -0.16
HCFC1P51610 AC133552.6-201ENST00000613406 534 ntBASIC14.03□□□□□ -0.16
HCFC1P51610 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
HCFC1P51610 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
HCFC1P51610 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
HCFC1P51610 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
HCFC1P51610 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 CDC14C-201ENST00000428251 1719 ntBASIC14.03□□□□□ -0.16
HCFC1P51610 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
HCFC1P51610 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 HIST3H2BA-201ENST00000436555 524 ntBASIC14.03□□□□□ -0.16
HCFC1P51610 CROCCP4-201ENST00000457096 498 ntBASIC14.03□□□□□ -0.16
HCFC1P51610 PACS1-203ENST00000524815 628 ntTSL 4 BASIC14.03□□□□□ -0.16
HCFC1P51610 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.03□□□□□ -0.16
HCFC1P51610 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
HCFC1P51610 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.03□□□□□ -0.16
HCFC1P51610 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
HCFC1P51610 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.03□□□□□ -0.16
HCFC1P51610 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.03□□□□□ -0.16
HCFC1P51610 BRI3BPP1-201ENST00000594224 787 ntBASIC14.03□□□□□ -0.16
HCFC1P51610 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.03□□□□□ -0.16
HCFC1P51610 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HCFC1P51610 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HCFC1P51610 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
HCFC1P51610 AL118508.1-201ENST00000613502 2345 ntBASIC14.03□□□□□ -0.16
HCFC1P51610 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HCFC1P51610 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
HCFC1P51610 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCFC1P51610 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCFC1P51610 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.02□□□□□ -0.16
HCFC1P51610 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCFC1P51610 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCFC1P51610 RNF216P1-203ENST00000404404 2427 ntBASIC14.02□□□□□ -0.16
HCFC1P51610 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCFC1P51610 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCFC1P51610 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCFC1P51610 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.02□□□□□ -0.16
HCFC1P51610 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
HCFC1P51610 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
HCFC1P51610 RN7SL399P-201ENST00000471648 279 ntBASIC14.02□□□□□ -0.16
HCFC1P51610 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.02□□□□□ -0.16
HCFC1P51610 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.02□□□□□ -0.16
HCFC1P51610 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.02□□□□□ -0.16
HCFC1P51610 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.02□□□□□ -0.16
HCFC1P51610 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.02□□□□□ -0.16
HCFC1P51610 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
HCFC1P51610 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
HCFC1P51610 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
HCFC1P51610 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.02□□□□□ -0.17
HCFC1P51610 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
HCFC1P51610 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.02□□□□□ -0.17
HCFC1P51610 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
HCFC1P51610 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
HCFC1P51610 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms