Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.46■□□□□ 0.23
HADHAP40939 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.46■□□□□ 0.23
HADHAP40939 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HADHAP40939 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HADHAP40939 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HADHAP40939 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HADHAP40939 AKAP8P1-201ENST00000434743 1349 ntBASIC16.45■□□□□ 0.22
HADHAP40939 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
HADHAP40939 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 AC005622.1-201ENST00000636801 1703 ntBASIC16.45■□□□□ 0.22
HADHAP40939 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.45■□□□□ 0.22
HADHAP40939 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.45■□□□□ 0.22
HADHAP40939 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 BX842568.4-201ENST00000421222 227 ntBASIC16.45■□□□□ 0.22
HADHAP40939 FAM58CP-201ENST00000435741 640 ntBASIC16.45■□□□□ 0.22
HADHAP40939 ACTG1P14-201ENST00000446382 1122 ntBASIC16.45■□□□□ 0.22
HADHAP40939 AC092865.5-201ENST00000545435 363 ntBASIC16.45■□□□□ 0.22
HADHAP40939 AC099522.2-201ENST00000607001 744 ntBASIC16.45■□□□□ 0.22
HADHAP40939 AC139530.3-201ENST00000620344 690 ntBASIC16.45■□□□□ 0.22
HADHAP40939 C20orf181-201ENST00000623918 480 ntBASIC16.45■□□□□ 0.22
HADHAP40939 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.45■□□□□ 0.22
HADHAP40939 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
HADHAP40939 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.45■□□□□ 0.22
HADHAP40939 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.45■□□□□ 0.22
HADHAP40939 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
HADHAP40939 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.45■□□□□ 0.22
HADHAP40939 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
HADHAP40939 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 AL592424.1-201ENST00000563624 1536 ntBASIC16.45■□□□□ 0.22
HADHAP40939 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
HADHAP40939 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
HADHAP40939 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.44■□□□□ 0.22
HADHAP40939 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.44■□□□□ 0.22
HADHAP40939 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.44■□□□□ 0.22
HADHAP40939 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HADHAP40939 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.44■□□□□ 0.22
HADHAP40939 MKNK2P1-201ENST00000437526 628 ntBASIC16.44■□□□□ 0.22
HADHAP40939 DNAJB3-201ENST00000446806 729 ntBASIC16.44■□□□□ 0.22
HADHAP40939 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.44■□□□□ 0.22
HADHAP40939 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.44■□□□□ 0.22
HADHAP40939 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.44■□□□□ 0.22
HADHAP40939 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
HADHAP40939 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.44■□□□□ 0.22
HADHAP40939 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
HADHAP40939 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
HADHAP40939 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
HADHAP40939 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
HADHAP40939 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HADHAP40939 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
HADHAP40939 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HADHAP40939 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.43■□□□□ 0.22
HADHAP40939 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HADHAP40939 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.43■□□□□ 0.22
HADHAP40939 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.43■□□□□ 0.22
HADHAP40939 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HADHAP40939 YBX2P1-201ENST00000394192 760 ntBASIC16.43■□□□□ 0.22
HADHAP40939 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.43■□□□□ 0.22
HADHAP40939 AL355306.1-201ENST00000415580 579 ntBASIC16.43■□□□□ 0.22
HADHAP40939 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms