Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC21.57■■□□□ 1.04
USP6P35125 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.57■■□□□ 1.04
USP6P35125 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
USP6P35125 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
USP6P35125 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
USP6P35125 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC21.57■■□□□ 1.04
USP6P35125 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
USP6P35125 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
USP6P35125 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
USP6P35125 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
USP6P35125 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC21.56■■□□□ 1.04
USP6P35125 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC21.56■■□□□ 1.04
USP6P35125 KRT90P-201ENST00000549264 1064 ntBASIC21.56■■□□□ 1.04
USP6P35125 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC21.56■■□□□ 1.04
USP6P35125 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC21.56■■□□□ 1.04
USP6P35125 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 FLJ38576-201ENST00000623820 2459 ntBASIC21.56■■□□□ 1.04
USP6P35125 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC21.56■■□□□ 1.04
USP6P35125 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC21.56■■□□□ 1.04
USP6P35125 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC21.56■■□□□ 1.04
USP6P35125 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
USP6P35125 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC21.56■■□□□ 1.04
USP6P35125 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
USP6P35125 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
USP6P35125 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
USP6P35125 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC21.56■■□□□ 1.04
USP6P35125 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 AL355864.2-201ENST00000447420 863 ntBASIC21.55■■□□□ 1.04
USP6P35125 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC21.55■■□□□ 1.04
USP6P35125 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 CMC2-214ENST00000565925 640 ntTSL 5 BASIC21.55■■□□□ 1.04
USP6P35125 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
USP6P35125 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.55■■□□□ 1.04
USP6P35125 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
USP6P35125 AGER-206ENST00000375070 1463 ntTSL 5 BASIC21.55■■□□□ 1.04
USP6P35125 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 AC005332.8-201ENST00000622750 2735 ntBASIC21.55■■□□□ 1.04
USP6P35125 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC21.55■■□□□ 1.04
USP6P35125 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.55■■□□□ 1.04
USP6P35125 BAATP1-201ENST00000412284 1225 ntBASIC21.55■■□□□ 1.04
USP6P35125 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC21.55■■□□□ 1.04
USP6P35125 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC21.55■■□□□ 1.04
USP6P35125 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 ATF5-205ENST00000600336 682 ntTSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
USP6P35125 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
USP6P35125 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.54■■□□□ 1.04
USP6P35125 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
USP6P35125 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
USP6P35125 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC21.54■■□□□ 1.04
USP6P35125 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC21.54■■□□□ 1.04
USP6P35125 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
USP6P35125 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
USP6P35125 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.54■■□□□ 1.04
USP6P35125 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms