Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.43■□□□□ 0.7
NCLP19338 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
NCLP19338 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC19.43■□□□□ 0.7
NCLP19338 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.43■□□□□ 0.7
NCLP19338 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
NCLP19338 AL671710.1-201ENST00000610245 2349 ntBASIC19.43■□□□□ 0.7
NCLP19338 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NCLP19338 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NCLP19338 AC079776.2-201ENST00000641154 1609 ntBASIC19.43■□□□□ 0.7
NCLP19338 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NCLP19338 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NCLP19338 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.43■□□□□ 0.7
NCLP19338 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.43■□□□□ 0.7
NCLP19338 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NCLP19338 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.43■□□□□ 0.7
NCLP19338 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC19.43■□□□□ 0.7
NCLP19338 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.42■□□□□ 0.7
NCLP19338 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC19.42■□□□□ 0.7
NCLP19338 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 MYO15B-237ENST00000642007 4893 ntBASIC19.42■□□□□ 0.7
NCLP19338 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.42■□□□□ 0.7
NCLP19338 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC19.42■□□□□ 0.7
NCLP19338 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NCLP19338 KRT18P67-201ENST00000432816 1264 ntBASIC19.42■□□□□ 0.7
NCLP19338 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.42■□□□□ 0.7
NCLP19338 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.42■□□□□ 0.7
NCLP19338 BX005266.1-201ENST00000473402 457 ntBASIC19.42■□□□□ 0.7
NCLP19338 AC079776.4-201ENST00000511039 504 ntBASIC19.42■□□□□ 0.7
NCLP19338 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.42■□□□□ 0.7
NCLP19338 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
NCLP19338 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.42■□□□□ 0.7
NCLP19338 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.42■□□□□ 0.7
NCLP19338 MTDHP3-201ENST00000594186 672 ntBASIC19.42■□□□□ 0.7
NCLP19338 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.42■□□□□ 0.7
NCLP19338 AL773604.1-201ENST00000617417 272 ntBASIC19.42■□□□□ 0.7
NCLP19338 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.42■□□□□ 0.7
NCLP19338 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NCLP19338 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
NCLP19338 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NCLP19338 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC19.42■□□□□ 0.7
NCLP19338 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
NCLP19338 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NCLP19338 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC19.41■□□□□ 0.7
NCLP19338 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC19.41■□□□□ 0.7
NCLP19338 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NCLP19338 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.41■□□□□ 0.7
NCLP19338 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
NCLP19338 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 AP003680.1-201ENST00000598970 3660 ntBASIC19.41■□□□□ 0.7
NCLP19338 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.41■□□□□ 0.7
NCLP19338 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.41■□□□□ 0.7
NCLP19338 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
NCLP19338 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.41■□□□□ 0.7
NCLP19338 AP001005.1-201ENST00000571755 1248 ntBASIC19.41■□□□□ 0.7
NCLP19338 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.41■□□□□ 0.7
NCLP19338 TERC-201ENST00000602385 541 ntBASIC19.41■□□□□ 0.7
NCLP19338 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.41■□□□□ 0.7
NCLP19338 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 AL139011.1-202ENST00000642063 584 ntBASIC19.41■□□□□ 0.7
NCLP19338 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NCLP19338 AL590787.1-201ENST00000568856 1315 ntBASIC19.41■□□□□ 0.7
NCLP19338 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.41■□□□□ 0.7
NCLP19338 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.41■□□□□ 0.7
NCLP19338 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms