Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RETP07949 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
RETP07949 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.34■□□□□ 0.21
RETP07949 ACTBP11-201ENST00000436287 1126 ntBASIC16.34■□□□□ 0.21
RETP07949 AC114501.2-201ENST00000439631 535 ntBASIC16.34■□□□□ 0.21
RETP07949 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.34■□□□□ 0.21
RETP07949 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
RETP07949 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.34■□□□□ 0.21
RETP07949 BANF1P1-201ENST00000553684 263 ntBASIC16.34■□□□□ 0.21
RETP07949 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.34■□□□□ 0.21
RETP07949 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.34■□□□□ 0.21
RETP07949 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.34■□□□□ 0.21
RETP07949 AC004790.1-201ENST00000612686 536 ntBASIC16.34■□□□□ 0.21
RETP07949 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.34■□□□□ 0.21
RETP07949 AC078925.2-201ENST00000624013 1973 ntBASIC16.34■□□□□ 0.21
RETP07949 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
RETP07949 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.34■□□□□ 0.21
RETP07949 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
RETP07949 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.34■□□□□ 0.21
RETP07949 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RETP07949 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RETP07949 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.21
RETP07949 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
RETP07949 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
RETP07949 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.33■□□□□ 0.21
RETP07949 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
RETP07949 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.33■□□□□ 0.21
RETP07949 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.33■□□□□ 0.2
RETP07949 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.33■□□□□ 0.2
RETP07949 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.33■□□□□ 0.2
RETP07949 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.33■□□□□ 0.2
RETP07949 AC092933.1-201ENST00000393644 945 ntBASIC16.33■□□□□ 0.2
RETP07949 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RETP07949 HAUS4P1-201ENST00000406739 1145 ntBASIC16.33■□□□□ 0.2
RETP07949 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RETP07949 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RETP07949 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.33■□□□□ 0.2
RETP07949 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.33■□□□□ 0.2
RETP07949 SERBP1P3-201ENST00000459980 809 ntBASIC16.33■□□□□ 0.2
RETP07949 AC098859.1-201ENST00000502915 1238 ntBASIC16.33■□□□□ 0.2
RETP07949 AC104989.1-201ENST00000519711 778 ntBASIC16.33■□□□□ 0.2
RETP07949 AC044860.1-202ENST00000559481 777 ntBASIC16.33■□□□□ 0.2
RETP07949 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 CYP2A7P1-201ENST00000595391 815 ntBASIC16.33■□□□□ 0.2
RETP07949 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.33■□□□□ 0.2
RETP07949 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.33■□□□□ 0.2
RETP07949 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 KRT8P44-201ENST00000441609 1350 ntBASIC16.33■□□□□ 0.2
RETP07949 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RETP07949 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RETP07949 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
RETP07949 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.33■□□□□ 0.2
RETP07949 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RETP07949 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.33■□□□□ 0.2
RETP07949 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RETP07949 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.33■□□□□ 0.2
RETP07949 AC046158.3-201ENST00000624947 2558 ntBASIC16.33■□□□□ 0.2
RETP07949 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RETP07949 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RETP07949 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
RETP07949 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.32■□□□□ 0.2
RETP07949 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RETP07949 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms