Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC1P02654 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.44□□□□□ -0.1
APOC1P02654 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC1P02654 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.44□□□□□ -0.1
APOC1P02654 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC1P02654 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC1P02654 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC1P02654 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
APOC1P02654 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
APOC1P02654 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC1P02654 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC1P02654 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.44□□□□□ -0.1
APOC1P02654 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
APOC1P02654 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC1P02654 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 AC092364.2-201ENST00000596710 2692 ntBASIC14.43□□□□□ -0.1
APOC1P02654 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 AC132872.4-202ENST00000622924 2756 ntBASIC14.43□□□□□ -0.1
APOC1P02654 AC105917.1-201ENST00000506637 2539 ntBASIC14.43□□□□□ -0.1
APOC1P02654 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC1P02654 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.43□□□□□ -0.1
APOC1P02654 VN2R19P-201ENST00000442399 1052 ntBASIC14.43□□□□□ -0.1
APOC1P02654 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
APOC1P02654 AL513480.1-201ENST00000451731 511 ntBASIC14.43□□□□□ -0.1
APOC1P02654 AP002469.2-201ENST00000531724 424 ntBASIC14.43□□□□□ -0.1
APOC1P02654 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 OR7E47P-204ENST00000575924 449 ntBASIC14.43□□□□□ -0.1
APOC1P02654 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 ACTL9-202ENST00000612068 1252 ntBASIC14.43□□□□□ -0.1
APOC1P02654 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC1P02654 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.43□□□□□ -0.1
APOC1P02654 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
APOC1P02654 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.43□□□□□ -0.1
APOC1P02654 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.42□□□□□ -0.1
APOC1P02654 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
APOC1P02654 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
APOC1P02654 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 U82695.1-201ENST00000635752 1889 ntBASIC14.42□□□□□ -0.1
APOC1P02654 AL596087.1-201ENST00000400979 1969 ntBASIC14.42□□□□□ -0.1
APOC1P02654 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 RNU1-129P-201ENST00000384064 167 ntBASIC14.42□□□□□ -0.1
APOC1P02654 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 AC079781.3-201ENST00000449110 356 ntBASIC14.42□□□□□ -0.1
APOC1P02654 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.42□□□□□ -0.1
APOC1P02654 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.42□□□□□ -0.1
APOC1P02654 AP001005.1-201ENST00000571755 1248 ntBASIC14.42□□□□□ -0.1
APOC1P02654 U1.21-201ENST00000580816 167 ntBASIC14.42□□□□□ -0.1
APOC1P02654 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 AL031055.1-201ENST00000606362 631 ntBASIC14.42□□□□□ -0.1
APOC1P02654 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.42□□□□□ -0.1
APOC1P02654 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 AL031008.1-201ENST00000619963 541 ntBASIC14.42□□□□□ -0.1
APOC1P02654 AC007064.4-201ENST00000637740 555 ntBASIC14.42□□□□□ -0.1
APOC1P02654 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.42□□□□□ -0.1
APOC1P02654 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.42□□□□□ -0.1
APOC1P02654 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.42□□□□□ -0.1
APOC1P02654 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
APOC1P02654 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms