Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC21.1■□□□□ 0.97
LTN1O94822 HADH-212ENST00000638621 741 ntTSL 5 BASIC21.1■□□□□ 0.97
LTN1O94822 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LTN1O94822 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC21.09■□□□□ 0.97
LTN1O94822 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.09■□□□□ 0.97
LTN1O94822 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LTN1O94822 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LTN1O94822 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
LTN1O94822 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC21.09■□□□□ 0.97
LTN1O94822 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 AC025279.2-201ENST00000569730 653 ntBASIC21.09■□□□□ 0.97
LTN1O94822 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LTN1O94822 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC21.09■□□□□ 0.97
LTN1O94822 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.09■□□□□ 0.97
LTN1O94822 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC21.09■□□□□ 0.97
LTN1O94822 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC21.09■□□□□ 0.97
LTN1O94822 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
LTN1O94822 AC134312.5-201ENST00000568031 1313 ntBASIC21.09■□□□□ 0.97
LTN1O94822 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.09■□□□□ 0.97
LTN1O94822 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.09■□□□□ 0.97
LTN1O94822 AC106886.4-201ENST00000623557 2502 ntBASIC21.09■□□□□ 0.97
LTN1O94822 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LTN1O94822 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LTN1O94822 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LTN1O94822 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.08■□□□□ 0.97
LTN1O94822 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LTN1O94822 ACTBP11-201ENST00000436287 1126 ntBASIC21.08■□□□□ 0.97
LTN1O94822 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC21.08■□□□□ 0.97
LTN1O94822 AL590640.2-201ENST00000457038 527 ntBASIC21.08■□□□□ 0.97
LTN1O94822 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC21.08■□□□□ 0.97
LTN1O94822 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC21.08■□□□□ 0.97
LTN1O94822 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LTN1O94822 MIR6869-201ENST00000619434 62 ntBASIC21.08■□□□□ 0.97
LTN1O94822 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LTN1O94822 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
LTN1O94822 AC020907.1-201ENST00000616460 1350 ntBASIC21.08■□□□□ 0.97
LTN1O94822 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LTN1O94822 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC21.08■□□□□ 0.96
LTN1O94822 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LTN1O94822 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LTN1O94822 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LTN1O94822 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
LTN1O94822 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LTN1O94822 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
LTN1O94822 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
LTN1O94822 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LTN1O94822 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LTN1O94822 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LTN1O94822 AC007969.1-201ENST00000433675 447 ntBASIC21.08■□□□□ 0.96
LTN1O94822 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
LTN1O94822 ENPP7P5-201ENST00000541031 1031 ntBASIC21.08■□□□□ 0.96
LTN1O94822 AC079316.1-201ENST00000548397 411 ntBASIC21.08■□□□□ 0.96
LTN1O94822 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LTN1O94822 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC21.08■□□□□ 0.96
LTN1O94822 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.08■□□□□ 0.96
LTN1O94822 AC244093.1-201ENST00000610837 814 ntBASIC21.08■□□□□ 0.96
LTN1O94822 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.07■□□□□ 0.96
LTN1O94822 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LTN1O94822 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC21.07■□□□□ 0.96
LTN1O94822 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 AL133338.1-201ENST00000565695 1517 ntBASIC21.07■□□□□ 0.96
LTN1O94822 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
LTN1O94822 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LTN1O94822 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC21.07■□□□□ 0.96
LTN1O94822 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
LTN1O94822 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC21.07■□□□□ 0.96
LTN1O94822 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
LTN1O94822 C2orf69P2-201ENST00000562032 1123 ntBASIC21.07■□□□□ 0.96
LTN1O94822 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC21.07■□□□□ 0.96
LTN1O94822 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LTN1O94822 AC011676.5-201ENST00000624864 2660 ntBASIC21.07■□□□□ 0.96
LTN1O94822 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LTN1O94822 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LTN1O94822 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LTN1O94822 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.06■□□□□ 0.96
LTN1O94822 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC21.06■□□□□ 0.96
LTN1O94822 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms