Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC3O60481 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ZIC3O60481 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.56□□□□□ -0.08
ZIC3O60481 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ZIC3O60481 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.56□□□□□ -0.08
ZIC3O60481 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.55□□□□□ -0.08
ZIC3O60481 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
ZIC3O60481 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.55□□□□□ -0.08
ZIC3O60481 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 CYP2T1P-202ENST00000641596 2535 ntBASIC14.55□□□□□ -0.08
ZIC3O60481 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
ZIC3O60481 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
ZIC3O60481 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
ZIC3O60481 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.55□□□□□ -0.08
ZIC3O60481 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.55□□□□□ -0.08
ZIC3O60481 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.55□□□□□ -0.08
ZIC3O60481 BCRP1-201ENST00000444246 691 ntBASIC14.55□□□□□ -0.08
ZIC3O60481 INGX-202ENST00000489074 768 ntBASIC14.55□□□□□ -0.08
ZIC3O60481 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.55□□□□□ -0.08
ZIC3O60481 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 SPCS2P1-201ENST00000561636 679 ntBASIC14.55□□□□□ -0.08
ZIC3O60481 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.55□□□□□ -0.08
ZIC3O60481 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.55□□□□□ -0.08
ZIC3O60481 AC087499.5-201ENST00000452760 1342 ntBASIC14.55□□□□□ -0.08
ZIC3O60481 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.55□□□□□ -0.08
ZIC3O60481 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
ZIC3O60481 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
ZIC3O60481 BNIP3P1-202ENST00000550043 1585 ntBASIC14.55□□□□□ -0.08
ZIC3O60481 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
ZIC3O60481 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.55□□□□□ -0.08
ZIC3O60481 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.54□□□□□ -0.08
ZIC3O60481 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC3O60481 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC3O60481 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC3O60481 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC3O60481 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.54□□□□□ -0.08
ZIC3O60481 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC3O60481 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.54□□□□□ -0.08
ZIC3O60481 AL512638.1-201ENST00000457493 794 ntBASIC14.54□□□□□ -0.08
ZIC3O60481 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.54□□□□□ -0.08
ZIC3O60481 AC011467.4-201ENST00000594891 528 ntBASIC14.54□□□□□ -0.08
ZIC3O60481 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.54□□□□□ -0.08
ZIC3O60481 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.54□□□□□ -0.08
ZIC3O60481 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 AP001282.1-201ENST00000531301 1499 ntBASIC14.54□□□□□ -0.08
ZIC3O60481 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC3O60481 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.54□□□□□ -0.08
ZIC3O60481 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.54□□□□□ -0.08
ZIC3O60481 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ZIC3O60481 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ZIC3O60481 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZIC3O60481 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.53□□□□□ -0.08
ZIC3O60481 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.53□□□□□ -0.08
ZIC3O60481 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms