Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SEMA3EO15041 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SEMA3EO15041 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SEMA3EO15041 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.4■□□□□ 0.7
SEMA3EO15041 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.4■□□□□ 0.7
SEMA3EO15041 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.4■□□□□ 0.7
SEMA3EO15041 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.4■□□□□ 0.7
SEMA3EO15041 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.4■□□□□ 0.7
SEMA3EO15041 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.4■□□□□ 0.7
SEMA3EO15041 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.4■□□□□ 0.7
SEMA3EO15041 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SEMA3EO15041 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.4■□□□□ 0.7
SEMA3EO15041 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 DEK-201ENST00000244776 1441 ntTSL 2 BASIC19.4■□□□□ 0.7
SEMA3EO15041 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SEMA3EO15041 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SEMA3EO15041 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SEMA3EO15041 AL118508.1-201ENST00000613502 2345 ntBASIC19.4■□□□□ 0.7
SEMA3EO15041 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SEMA3EO15041 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SEMA3EO15041 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SEMA3EO15041 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SEMA3EO15041 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SEMA3EO15041 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.39■□□□□ 0.69
SEMA3EO15041 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.39■□□□□ 0.69
SEMA3EO15041 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.39■□□□□ 0.69
SEMA3EO15041 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SEMA3EO15041 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC19.39■□□□□ 0.69
SEMA3EO15041 RPL13P2-201ENST00000440687 659 ntBASIC19.39■□□□□ 0.69
SEMA3EO15041 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC19.39■□□□□ 0.69
SEMA3EO15041 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC19.39■□□□□ 0.69
SEMA3EO15041 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SEMA3EO15041 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SEMA3EO15041 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.39■□□□□ 0.69
SEMA3EO15041 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.39■□□□□ 0.69
SEMA3EO15041 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC19.39■□□□□ 0.69
SEMA3EO15041 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
SEMA3EO15041 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.69
SEMA3EO15041 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SEMA3EO15041 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.39■□□□□ 0.69
SEMA3EO15041 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SEMA3EO15041 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SEMA3EO15041 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SEMA3EO15041 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.38■□□□□ 0.69
SEMA3EO15041 MIR648-201ENST00000385046 94 ntBASIC19.38■□□□□ 0.69
SEMA3EO15041 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.38■□□□□ 0.69
SEMA3EO15041 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 DGCR5-201ENST00000399539 862 ntBASIC19.38■□□□□ 0.69
SEMA3EO15041 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SEMA3EO15041 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.38■□□□□ 0.69
SEMA3EO15041 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC19.38■□□□□ 0.69
SEMA3EO15041 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC19.38■□□□□ 0.69
SEMA3EO15041 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 AC138969.3-201ENST00000546612 1459 ntBASIC19.38■□□□□ 0.69
SEMA3EO15041 AC138932.2-201ENST00000548268 1459 ntBASIC19.38■□□□□ 0.69
SEMA3EO15041 AC126755.4-201ENST00000549796 1459 ntBASIC19.38■□□□□ 0.69
SEMA3EO15041 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 RARRES2P5-201ENST00000564013 466 ntBASIC19.38■□□□□ 0.69
SEMA3EO15041 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
SEMA3EO15041 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.38■□□□□ 0.69
SEMA3EO15041 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.38■□□□□ 0.69
SEMA3EO15041 AC008494.3-201ENST00000606615 944 ntBASIC19.38■□□□□ 0.69
SEMA3EO15041 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SEMA3EO15041 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SEMA3EO15041 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
SEMA3EO15041 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SEMA3EO15041 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms