Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
ATP2A1O14983 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A1O14983 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A1O14983 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.49■□□□□ 0.55
ATP2A1O14983 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP2A1O14983 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC18.49■□□□□ 0.55
ATP2A1O14983 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 POLE2-203ENST00000553805 496 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 WASH4P-201ENST00000564273 1246 ntBASIC18.49■□□□□ 0.55
ATP2A1O14983 AC007431.3-201ENST00000623221 587 ntBASIC18.49■□□□□ 0.55
ATP2A1O14983 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATP2A1O14983 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
ATP2A1O14983 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ATP2A1O14983 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ATP2A1O14983 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A1O14983 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A1O14983 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A1O14983 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
ATP2A1O14983 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A1O14983 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A1O14983 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.48■□□□□ 0.55
ATP2A1O14983 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP2A1O14983 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A1O14983 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.48■□□□□ 0.55
ATP2A1O14983 INE1-201ENST00000456273 945 ntBASIC18.48■□□□□ 0.55
ATP2A1O14983 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.48■□□□□ 0.55
ATP2A1O14983 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.48■□□□□ 0.55
ATP2A1O14983 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.48■□□□□ 0.55
ATP2A1O14983 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A1O14983 IGHV3-72-202ENST00000621503 303 ntBASIC18.48■□□□□ 0.55
ATP2A1O14983 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ATP2A1O14983 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.48■□□□□ 0.55
ATP2A1O14983 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
ATP2A1O14983 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ATP2A1O14983 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A1O14983 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A1O14983 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.47■□□□□ 0.55
ATP2A1O14983 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ATP2A1O14983 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A1O14983 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP2A1O14983 RN7SL752P-201ENST00000463779 287 ntBASIC18.47■□□□□ 0.55
ATP2A1O14983 GIMAP3P-201ENST00000495150 836 ntBASIC18.47■□□□□ 0.55
ATP2A1O14983 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
ATP2A1O14983 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP2A1O14983 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A1O14983 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A1O14983 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC18.47■□□□□ 0.55
ATP2A1O14983 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A1O14983 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ATP2A1O14983 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A1O14983 AC012313.1-201ENST00000593393 3059 ntBASIC18.47■□□□□ 0.55
ATP2A1O14983 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.47■□□□□ 0.55
ATP2A1O14983 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ATP2A1O14983 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ATP2A1O14983 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ATP2A1O14983 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ATP2A1O14983 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A1O14983 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.46■□□□□ 0.55
ATP2A1O14983 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ATP2A1O14983 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms