Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
UBFD1O14562 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.76■□□□□ 0.11
UBFD1O14562 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.76■□□□□ 0.11
UBFD1O14562 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
UBFD1O14562 AC011477.6-201ENST00000604980 1927 ntBASIC15.76■□□□□ 0.11
UBFD1O14562 AC025580.3-201ENST00000617932 1424 ntBASIC15.76■□□□□ 0.11
UBFD1O14562 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
UBFD1O14562 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
UBFD1O14562 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 TNRC18P2-201ENST00000417666 2714 ntBASIC15.75■□□□□ 0.11
UBFD1O14562 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
UBFD1O14562 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
UBFD1O14562 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
UBFD1O14562 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.75■□□□□ 0.11
UBFD1O14562 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 AC245100.5-201ENST00000452108 331 ntBASIC15.75■□□□□ 0.11
UBFD1O14562 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.75■□□□□ 0.11
UBFD1O14562 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.75■□□□□ 0.11
UBFD1O14562 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.75■□□□□ 0.11
UBFD1O14562 AC002347.1-201ENST00000569543 541 ntBASIC15.75■□□□□ 0.11
UBFD1O14562 AP001005.1-201ENST00000571755 1248 ntBASIC15.75■□□□□ 0.11
UBFD1O14562 SLC25A6P4-201ENST00000586535 553 ntBASIC15.75■□□□□ 0.11
UBFD1O14562 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.75■□□□□ 0.11
UBFD1O14562 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.75■□□□□ 0.11
UBFD1O14562 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
UBFD1O14562 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.75■□□□□ 0.11
UBFD1O14562 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
UBFD1O14562 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
UBFD1O14562 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.74■□□□□ 0.11
UBFD1O14562 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
UBFD1O14562 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.74■□□□□ 0.11
UBFD1O14562 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.74■□□□□ 0.11
UBFD1O14562 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.74■□□□□ 0.11
UBFD1O14562 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.74■□□□□ 0.11
UBFD1O14562 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.74■□□□□ 0.11
UBFD1O14562 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 AL365330.1-201ENST00000607459 531 ntBASIC15.74■□□□□ 0.11
UBFD1O14562 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 Z83851.2-201ENST00000609564 659 ntBASIC15.74■□□□□ 0.11
UBFD1O14562 AC004877.2-201ENST00000623941 599 ntBASIC15.74■□□□□ 0.11
UBFD1O14562 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 AC134407.2-201ENST00000625089 1978 ntBASIC15.74■□□□□ 0.11
UBFD1O14562 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
UBFD1O14562 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.74■□□□□ 0.11
UBFD1O14562 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
UBFD1O14562 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
UBFD1O14562 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms