Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM38O00635 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM38O00635 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM38O00635 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM38O00635 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 AC002472.2-201ENST00000442739 958 ntBASIC16.38■□□□□ 0.21
TRIM38O00635 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.38■□□□□ 0.21
TRIM38O00635 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM38O00635 AP002490.2-201ENST00000524791 560 ntBASIC16.38■□□□□ 0.21
TRIM38O00635 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.38■□□□□ 0.21
TRIM38O00635 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.38■□□□□ 0.21
TRIM38O00635 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 AC190387.1-201ENST00000551683 408 ntBASIC16.38■□□□□ 0.21
TRIM38O00635 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.38■□□□□ 0.21
TRIM38O00635 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.38■□□□□ 0.21
TRIM38O00635 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRIM38O00635 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRIM38O00635 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRIM38O00635 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
TRIM38O00635 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM38O00635 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRIM38O00635 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM38O00635 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM38O00635 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM38O00635 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM38O00635 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM38O00635 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM38O00635 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM38O00635 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
TRIM38O00635 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 SPDYE7P-202ENST00000420373 878 ntBASIC16.37■□□□□ 0.21
TRIM38O00635 AC015922.1-201ENST00000421102 1152 ntBASIC16.37■□□□□ 0.21
TRIM38O00635 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.37■□□□□ 0.21
TRIM38O00635 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM38O00635 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.37■□□□□ 0.21
TRIM38O00635 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.37■□□□□ 0.21
TRIM38O00635 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.37■□□□□ 0.21
TRIM38O00635 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRIM38O00635 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.37■□□□□ 0.21
TRIM38O00635 AL031055.1-201ENST00000606362 631 ntBASIC16.37■□□□□ 0.21
TRIM38O00635 AL390754.1-201ENST00000619088 582 ntBASIC16.37■□□□□ 0.21
TRIM38O00635 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.37■□□□□ 0.21
TRIM38O00635 AF228730.6-201ENST00000641497 218 ntBASIC16.37■□□□□ 0.21
TRIM38O00635 AC084121.3-201ENST00000641716 218 ntBASIC16.37■□□□□ 0.21
TRIM38O00635 AC105233.6-201ENST00000642093 218 ntBASIC16.37■□□□□ 0.21
TRIM38O00635 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
TRIM38O00635 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.37■□□□□ 0.21
TRIM38O00635 AL391256.1-201ENST00000443260 1855 ntBASIC16.37■□□□□ 0.21
TRIM38O00635 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRIM38O00635 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRIM38O00635 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms