Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.69■□□□□ 0.9
CHL1O00533 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC20.69■□□□□ 0.9
CHL1O00533 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CHL1O00533 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
CHL1O00533 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
CHL1O00533 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHL1O00533 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC20.68■□□□□ 0.9
CHL1O00533 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHL1O00533 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CHL1O00533 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CHL1O00533 AC136604.1-201ENST00000418535 575 ntBASIC20.68■□□□□ 0.9
CHL1O00533 RPL13P2-201ENST00000440687 659 ntBASIC20.68■□□□□ 0.9
CHL1O00533 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC20.68■□□□□ 0.9
CHL1O00533 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 HNRNPUP1-201ENST00000554987 333 ntBASIC20.68■□□□□ 0.9
CHL1O00533 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.68■□□□□ 0.9
CHL1O00533 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.68■□□□□ 0.9
CHL1O00533 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC20.68■□□□□ 0.9
CHL1O00533 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHL1O00533 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.67■□□□□ 0.9
CHL1O00533 CDC14C-201ENST00000428251 1719 ntBASIC20.67■□□□□ 0.9
CHL1O00533 AC018892.3-201ENST00000623986 2499 ntBASIC20.67■□□□□ 0.9
CHL1O00533 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CHL1O00533 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHL1O00533 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHL1O00533 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
CHL1O00533 PIN1P1-201ENST00000412108 996 ntBASIC20.67■□□□□ 0.9
CHL1O00533 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.67■□□□□ 0.9
CHL1O00533 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC20.67■□□□□ 0.9
CHL1O00533 COX20P2-201ENST00000452636 358 ntBASIC20.67■□□□□ 0.9
CHL1O00533 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.67■□□□□ 0.9
CHL1O00533 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC20.67■□□□□ 0.9
CHL1O00533 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.67■□□□□ 0.9
CHL1O00533 SPDYE22P-201ENST00000582158 798 ntBASIC20.67■□□□□ 0.9
CHL1O00533 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHL1O00533 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.67■□□□□ 0.9
CHL1O00533 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHL1O00533 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CHL1O00533 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHL1O00533 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CHL1O00533 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHL1O00533 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHL1O00533 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.67■□□□□ 0.9
CHL1O00533 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
CHL1O00533 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHL1O00533 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHL1O00533 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.66■□□□□ 0.9
CHL1O00533 AL603832.2-201ENST00000566195 2125 ntBASIC20.66■□□□□ 0.9
CHL1O00533 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 AC124067.4-201ENST00000519691 2379 ntBASIC20.66■□□□□ 0.9
CHL1O00533 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CHL1O00533 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC20.66■□□□□ 0.9
CHL1O00533 CRB3P1-201ENST00000449338 276 ntBASIC20.66■□□□□ 0.9
CHL1O00533 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.66■□□□□ 0.9
CHL1O00533 DOC2GP-202ENST00000514950 1163 ntBASIC20.66■□□□□ 0.9
CHL1O00533 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.66■□□□□ 0.9
CHL1O00533 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.66■□□□□ 0.9
CHL1O00533 AL450472.2-201ENST00000603663 1156 ntBASIC20.66■□□□□ 0.9
CHL1O00533 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC20.66■□□□□ 0.9
CHL1O00533 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 AC112504.1-201ENST00000623415 1841 ntBASIC20.66■□□□□ 0.9
CHL1O00533 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC20.66■□□□□ 0.9
CHL1O00533 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHL1O00533 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHL1O00533 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHL1O00533 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC20.65■□□□□ 0.9
CHL1O00533 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHL1O00533 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC20.65■□□□□ 0.9
CHL1O00533 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHL1O00533 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.65■□□□□ 0.9
CHL1O00533 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CHL1O00533 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.65■□□□□ 0.9
CHL1O00533 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms