Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
CDC42BPBQ9Y5S2 AL008638.5-201ENST00000623814 1298 ntBASIC24.01■■□□□ 1.43
CDC42BPBQ9Y5S2 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CDC42BPBQ9Y5S2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC24.01■■□□□ 1.43
CDC42BPBQ9Y5S2 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 ACTG1P17-201ENST00000558391 1119 ntBASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CDC42BPBQ9Y5S2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 ACTBP8-201ENST00000403258 1108 ntBASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 GAPDHP40-201ENST00000505218 1006 ntBASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 AC138951.2-201ENST00000623455 1161 ntBASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 ME2P1-201ENST00000426028 1970 ntBASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CDC42BPBQ9Y5S2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 KRT8P13-201ENST00000463294 1010 ntBASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 AC091804.1-201ENST00000486888 567 ntBASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 RNA5SP423-201ENST00000517127 109 ntBASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 AC104306.2-201ENST00000451877 341 ntBASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 AP001582.1-201ENST00000525856 295 ntBASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CDC42BPBQ9Y5S2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 KSR1-207ENST00000578981 748 ntTSL 4 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CDC42BPBQ9Y5S2 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CDC42BPBQ9Y5S2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms