Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 AL589987.1-201ENST00000453380 819 ntBASIC19.42■□□□□ 0.7
SALL1Q9NSC2 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 CHCHD2P3-201ENST00000603038 451 ntBASIC19.42■□□□□ 0.7
SALL1Q9NSC2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SALL1Q9NSC2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 MEP1AP4-201ENST00000423244 1087 ntBASIC19.41■□□□□ 0.7
SALL1Q9NSC2 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SALL1Q9NSC2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 BCL2-203ENST00000589955 5011 ntBASIC19.4■□□□□ 0.7
SALL1Q9NSC2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AC098614.1-201ENST00000368528 745 ntBASIC19.4■□□□□ 0.7
SALL1Q9NSC2 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AC023310.3-201ENST00000557027 670 ntBASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AC100756.1-201ENST00000562736 682 ntBASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AC138749.3-201ENST00000567691 622 ntBASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SALL1Q9NSC2 AC116165.1-201ENST00000611806 668 ntBASIC19.4■□□□□ 0.7
SALL1Q9NSC2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms