Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 AL135744.1-201ENST00000565098 629 ntBASIC14.53□□□□□ -0.08
NELFAQ9H3P2 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 AC026691.1-201ENST00000602502 2017 ntBASIC14.53□□□□□ -0.08
NELFAQ9H3P2 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 AC008741.2-201ENST00000612792 3115 ntBASIC14.52□□□□□ -0.08
NELFAQ9H3P2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
NELFAQ9H3P2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 TFAMP1-201ENST00000412727 736 ntBASIC14.52□□□□□ -0.09
NELFAQ9H3P2 AC211486.1-202ENST00000416371 468 ntBASIC14.52□□□□□ -0.09
NELFAQ9H3P2 AL671277.1-201ENST00000429656 993 ntBASIC14.52□□□□□ -0.09
NELFAQ9H3P2 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 AP006288.1-201ENST00000446065 395 ntBASIC14.52□□□□□ -0.09
NELFAQ9H3P2 KRT18P34-201ENST00000488218 1270 ntBASIC14.52□□□□□ -0.09
NELFAQ9H3P2 AC211476.1-201ENST00000503899 468 ntBASIC14.52□□□□□ -0.09
NELFAQ9H3P2 KRT8P48-201ENST00000515599 1220 ntBASIC14.52□□□□□ -0.09
NELFAQ9H3P2 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 AC139530.3-201ENST00000620344 690 ntBASIC14.52□□□□□ -0.09
NELFAQ9H3P2 AC134684.3-201ENST00000641758 218 ntBASIC14.52□□□□□ -0.09
NELFAQ9H3P2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
NELFAQ9H3P2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms