Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 AC120114.3-201ENST00000611923 658 ntBASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 AC020765.3-201ENST00000613051 740 ntBASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.26■□□□□ 0.03
AMBRA1Q9C0C7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 FER1L4-210ENST00000615531 5998 ntBASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 AC129492.6-201ENST00000611383 1305 ntBASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 HCG4-201ENST00000418983 998 ntBASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 KRT18P27-201ENST00000427733 1299 ntBASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 RPS15P9-201ENST00000494093 319 ntBASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 AC006557.2-201ENST00000592985 1240 ntBASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
AMBRA1Q9C0C7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 AL009178.2-201ENST00000597278 2719 ntBASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 AC093909.1-201ENST00000504731 1122 ntBASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 BX640515.1-201ENST00000617215 977 ntBASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 GGTLC5P-201ENST00000617623 998 ntBASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
AMBRA1Q9C0C7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms