Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 AC092865.6-201ENST00000642101 219 ntBASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 AC005622.1-201ENST00000636801 1703 ntBASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.82■□□□□ 0.28
FOXP3Q9BZS1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 HMGN1P19-201ENST00000436976 333 ntBASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 RPS15P9-201ENST00000494093 319 ntBASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 AL355385.1-201ENST00000606123 409 ntBASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 AC092919.2-201ENST00000623631 1645 ntBASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FOXP3Q9BZS1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 U82695.1-201ENST00000635752 1889 ntBASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 VN2R19P-201ENST00000442399 1052 ntBASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 ALG1L5P-201ENST00000482043 771 ntBASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 AC004790.2-201ENST00000623588 572 ntBASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FOXP3Q9BZS1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms