Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SMOQ99835 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
SMOQ99835 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SMOQ99835 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMOQ99835 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.96■□□□□ 0.3
SMOQ99835 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMOQ99835 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SMOQ99835 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SMOQ99835 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.95■□□□□ 0.3
SMOQ99835 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SMOQ99835 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 AC134407.2-201ENST00000625089 1978 ntBASIC16.95■□□□□ 0.3
SMOQ99835 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.95■□□□□ 0.3
SMOQ99835 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.95■□□□□ 0.3
SMOQ99835 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 MIR661-201ENST00000384842 89 ntBASIC16.95■□□□□ 0.3
SMOQ99835 MIR648-201ENST00000385046 94 ntBASIC16.95■□□□□ 0.3
SMOQ99835 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.95■□□□□ 0.3
SMOQ99835 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 FAM8A3P-201ENST00000427218 844 ntBASIC16.95■□□□□ 0.3
SMOQ99835 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.95■□□□□ 0.3
SMOQ99835 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.95■□□□□ 0.3
SMOQ99835 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.95■□□□□ 0.3
SMOQ99835 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 AC010336.2-201ENST00000564226 506 ntBASIC16.95■□□□□ 0.3
SMOQ99835 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SMOQ99835 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.95■□□□□ 0.3
SMOQ99835 AL033527.5-202ENST00000641632 1098 ntBASIC16.95■□□□□ 0.3
SMOQ99835 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.95■□□□□ 0.3
SMOQ99835 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.95■□□□□ 0.3
SMOQ99835 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.95■□□□□ 0.3
SMOQ99835 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
SMOQ99835 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.95■□□□□ 0.3
SMOQ99835 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SMOQ99835 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SMOQ99835 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SMOQ99835 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 AC022144.1-201ENST00000602255 1580 ntBASIC16.94■□□□□ 0.3
SMOQ99835 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SMOQ99835 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SMOQ99835 CYP2T1P-202ENST00000641596 2535 ntBASIC16.94■□□□□ 0.3
SMOQ99835 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
SMOQ99835 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.94■□□□□ 0.3
SMOQ99835 EEF1DP4-201ENST00000446006 880 ntBASIC16.94■□□□□ 0.3
SMOQ99835 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.94■□□□□ 0.3
SMOQ99835 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.94■□□□□ 0.3
SMOQ99835 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
SMOQ99835 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SMOQ99835 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.94■□□□□ 0.3
SMOQ99835 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.93■□□□□ 0.3
SMOQ99835 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SMOQ99835 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SMOQ99835 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms