Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 AC098859.1-201ENST00000502915 1238 ntBASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 MTDHP5-201ENST00000598980 586 ntBASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.17■□□□□ 0.02
MS4A4EQ96PG1 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AC008677.1-201ENST00000519230 1561 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AC112504.1-201ENST00000623415 1841 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 MKNK2P1-201ENST00000437526 628 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 SPDYE11-202ENST00000450699 704 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AL138918.1-201ENST00000568306 659 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 SPDYE9P-201ENST00000570642 692 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AC027307.2-201ENST00000591252 911 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AL671883.3-201ENST00000603274 991 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 AC026120.1-201ENST00000611536 926 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 SPDYE10P-202ENST00000612005 668 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 SPDYE8P-202ENST00000612377 668 ntBASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.16■□□□□ 0.02
MS4A4EQ96PG1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms