Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
CFAP53Q96M91 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 CYP4F24P-201ENST00000586049 1580 ntBASIC21.65■■□□□ 1.06
CFAP53Q96M91 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CFAP53Q96M91 AL691432.1-201ENST00000596308 1422 ntBASIC21.64■■□□□ 1.06
CFAP53Q96M91 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.64■■□□□ 1.06
CFAP53Q96M91 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC21.64■■□□□ 1.06
CFAP53Q96M91 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CFAP53Q96M91 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CFAP53Q96M91 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.64■■□□□ 1.06
CFAP53Q96M91 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 AC006449.5-201ENST00000610658 2098 ntBASIC21.64■■□□□ 1.05
CFAP53Q96M91 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 SPDYE17-201ENST00000412399 783 ntBASIC21.64■■□□□ 1.05
CFAP53Q96M91 AL080243.2-201ENST00000418783 582 ntBASIC21.64■■□□□ 1.05
CFAP53Q96M91 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 AQP6-203ENST00000551733 849 ntTSL 3 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 AC011467.4-201ENST00000594891 528 ntBASIC21.64■■□□□ 1.05
CFAP53Q96M91 TEX28P1-201ENST00000613479 1221 ntBASIC21.64■■□□□ 1.05
CFAP53Q96M91 TEX28P2-201ENST00000617764 1221 ntBASIC21.64■■□□□ 1.05
CFAP53Q96M91 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
CFAP53Q96M91 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CFAP53Q96M91 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 AC100757.3-201ENST00000622361 1406 ntBASIC21.63■■□□□ 1.05
CFAP53Q96M91 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP53Q96M91 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 AL596087.1-201ENST00000400979 1969 ntBASIC21.63■■□□□ 1.05
CFAP53Q96M91 CES3-203ENST00000543856 3178 ntTSL 2 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP53Q96M91 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP53Q96M91 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP53Q96M91 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP53Q96M91 AC004987.2-201ENST00000395959 1148 ntBASIC21.63■■□□□ 1.05
CFAP53Q96M91 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP53Q96M91 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP53Q96M91 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP53Q96M91 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
CFAP53Q96M91 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CFAP53Q96M91 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CFAP53Q96M91 KRT8P12-202ENST00000472924 1397 ntBASIC21.62■■□□□ 1.05
CFAP53Q96M91 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CFAP53Q96M91 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CFAP53Q96M91 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 AL590560.3-201ENST00000623350 461 ntBASIC21.62■■□□□ 1.05
CFAP53Q96M91 WT1-209ENST00000530998 2421 ntTSL 2 BASIC21.62■■□□□ 1.05
CFAP53Q96M91 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms