Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATL1Q8WXF7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 MKNK2P1-201ENST00000437526 628 ntBASIC15.91■□□□□ 0.14
ATL1Q8WXF7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATL1Q8WXF7 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 YBX2P1-201ENST00000394192 760 ntBASIC15.9■□□□□ 0.14
ATL1Q8WXF7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 TFAMP1-201ENST00000412727 736 ntBASIC15.9■□□□□ 0.14
ATL1Q8WXF7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 AC105233.2-201ENST00000523697 349 ntBASIC15.9■□□□□ 0.14
ATL1Q8WXF7 AF228730.5-201ENST00000530288 346 ntBASIC15.9■□□□□ 0.14
ATL1Q8WXF7 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.9■□□□□ 0.14
ATL1Q8WXF7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
ATL1Q8WXF7 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms