Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 AC097359.3-201ENST00000603982 1210 ntBASIC19.4■□□□□ 0.7
SLX4Q8IY92 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLX4Q8IY92 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLX4Q8IY92 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.39■□□□□ 0.7
SLX4Q8IY92 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.39■□□□□ 0.7
SLX4Q8IY92 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.39■□□□□ 0.7
SLX4Q8IY92 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.39■□□□□ 0.7
SLX4Q8IY92 AC093813.1-201ENST00000605066 256 ntBASIC19.39■□□□□ 0.7
SLX4Q8IY92 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SLX4Q8IY92 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SLX4Q8IY92 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SLX4Q8IY92 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.39■□□□□ 0.69
SLX4Q8IY92 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 RNF216P1-203ENST00000404404 2427 ntBASIC19.39■□□□□ 0.69
SLX4Q8IY92 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 AC018470.1-201ENST00000624790 3129 ntBASIC19.39■□□□□ 0.69
SLX4Q8IY92 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SLX4Q8IY92 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 AC006001.1-201ENST00000325130 474 ntBASIC19.39■□□□□ 0.69
SLX4Q8IY92 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
SLX4Q8IY92 BTBD6P1-201ENST00000412176 1267 ntBASIC19.39■□□□□ 0.69
SLX4Q8IY92 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.39■□□□□ 0.69
SLX4Q8IY92 Z93015.1-201ENST00000451718 390 ntBASIC19.39■□□□□ 0.69
SLX4Q8IY92 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SLX4Q8IY92 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.39■□□□□ 0.69
SLX4Q8IY92 AC015910.1-201ENST00000579400 975 ntBASIC19.39■□□□□ 0.69
SLX4Q8IY92 AL450472.2-201ENST00000603663 1156 ntBASIC19.39■□□□□ 0.69
SLX4Q8IY92 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC19.39■□□□□ 0.69
SLX4Q8IY92 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLX4Q8IY92 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 AC134407.2-201ENST00000625089 1978 ntBASIC19.38■□□□□ 0.69
SLX4Q8IY92 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 SCARNA20.5-201ENST00000516991 142 ntBASIC19.38■□□□□ 0.69
SLX4Q8IY92 AP001582.1-201ENST00000525856 295 ntBASIC19.38■□□□□ 0.69
SLX4Q8IY92 CHMP4BP1-201ENST00000556017 588 ntBASIC19.38■□□□□ 0.69
SLX4Q8IY92 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 MIR4741-201ENST00000579822 90 ntBASIC19.38■□□□□ 0.69
SLX4Q8IY92 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.38■□□□□ 0.69
SLX4Q8IY92 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLX4Q8IY92 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLX4Q8IY92 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 FXNP2-201ENST00000411625 547 ntBASIC19.37■□□□□ 0.69
SLX4Q8IY92 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 EIF4HP1-201ENST00000453115 687 ntBASIC19.37■□□□□ 0.69
SLX4Q8IY92 HIST2H2BC-201ENST00000498492 580 ntBASIC19.37■□□□□ 0.69
SLX4Q8IY92 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLX4Q8IY92 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLX4Q8IY92 AP001258.2-201ENST00000529891 490 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms