Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SCN4BQ8IWT1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 AC002472.2-201ENST00000442739 958 ntBASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 AL139010.1-201ENST00000454878 894 ntBASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 RN7SL204P-201ENST00000582831 262 ntBASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 AC138761.1-201ENST00000584393 385 ntBASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 MIR4321-201ENST00000592276 80 ntBASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 REXO1L8P-201ENST00000604378 1897 ntBASIC17.1■□□□□ 0.33
SCN4BQ8IWT1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 MIR661-201ENST00000384842 89 ntBASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 AL080243.2-201ENST00000418783 582 ntBASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 AC022144.1-201ENST00000602255 1580 ntBASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCN4BQ8IWT1 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCN4BQ8IWT1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms