Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 AL391256.1-201ENST00000443260 1855 ntBASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 BX276092.7-203ENST00000637198 1536 ntBASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 AC004817.3-201ENST00000602957 2129 ntBASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDZRN4Q6ZMN7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AC003669.1-201ENST00000334569 611 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AC005104.2-201ENST00000427818 678 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AL591424.1-201ENST00000442569 1213 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 UNC93B6-202ENST00000528242 690 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AL356488.2-201ENST00000602755 427 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AC140113.2-201ENST00000604370 208 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AC019129.2-201ENST00000609837 1235 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AL589182.2-201ENST00000619332 1049 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 MIR1199-201ENST00000621445 119 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AL596087.1-201ENST00000400979 1969 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AC132938.5-201ENST00000624980 1813 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AL365209.1-201ENST00000624418 6473 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 AP005117.1-202ENST00000581724 1908 ntBASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.78■□□□□ 0.6
PDZRN4Q6ZMN7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 KLF4P1-201ENST00000412782 1185 ntBASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 MED15P5-201ENST00000423150 992 ntBASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 PGM5P2-202ENST00000637225 1043 ntBASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDZRN4Q6ZMN7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
PDZRN4Q6ZMN7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.77■□□□□ 0.59
PDZRN4Q6ZMN7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDZRN4Q6ZMN7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDZRN4Q6ZMN7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms