Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 AC016694.1-201ENST00000434179 700 ntBASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 AC012441.1-201ENST00000446669 685 ntBASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 AC099548.2-209ENST00000480264 625 ntBASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 SLED1-202ENST00000512051 380 ntBASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 CLUHP6-201ENST00000580789 941 ntBASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 AC068587.10-201ENST00000641210 219 ntBASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNKSR3Q6P9H4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CNKSR3Q6P9H4 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNKSR3Q6P9H4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNKSR3Q6P9H4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CNKSR3Q6P9H4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNKSR3Q6P9H4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CNKSR3Q6P9H4 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.27■□□□□ 0.35
CNKSR3Q6P9H4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 KRT18P64-201ENST00000434946 1219 ntBASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 VDAC1P7-201ENST00000462417 847 ntBASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 AP001063.1-201ENST00000568332 529 ntBASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 AC010328.2-201ENST00000597698 1111 ntBASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.26■□□□□ 0.35
CNKSR3Q6P9H4 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 AC134312.5-201ENST00000568031 1313 ntBASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNKSR3Q6P9H4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms