Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDH1Q08174 AL135744.1-201ENST00000565098 629 ntBASIC15.69■□□□□ 0.1
PCDH1Q08174 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDH1Q08174 AL671883.3-201ENST00000603274 991 ntBASIC15.69■□□□□ 0.1
PCDH1Q08174 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDH1Q08174 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDH1Q08174 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDH1Q08174 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 AC007950.2-201ENST00000615045 2347 ntBASIC15.68■□□□□ 0.1
PCDH1Q08174 LINC02199-201ENST00000506655 2702 ntBASIC15.68■□□□□ 0.1
PCDH1Q08174 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
PCDH1Q08174 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 HAUS4P1-201ENST00000406739 1145 ntBASIC15.68■□□□□ 0.1
PCDH1Q08174 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 AC023274.1-201ENST00000418278 595 ntBASIC15.68■□□□□ 0.1
PCDH1Q08174 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 AC142381.1-201ENST00000426099 345 ntBASIC15.68■□□□□ 0.1
PCDH1Q08174 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 AC243562.1-201ENST00000560672 389 ntBASIC15.68■□□□□ 0.1
PCDH1Q08174 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDH1Q08174 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.68■□□□□ 0.1
PCDH1Q08174 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 SPTSSB-204ENST00000617024 1292 ntBASIC15.68■□□□□ 0.1
PCDH1Q08174 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.68■□□□□ 0.1
PCDH1Q08174 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
PCDH1Q08174 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
PCDH1Q08174 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.68■□□□□ 0.1
PCDH1Q08174 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PCDH1Q08174 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.67■□□□□ 0.1
PCDH1Q08174 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH1Q08174 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.67■□□□□ 0.1
PCDH1Q08174 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 AC011477.6-201ENST00000604980 1927 ntBASIC15.67■□□□□ 0.1
PCDH1Q08174 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
PCDH1Q08174 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDH1Q08174 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDH1Q08174 FAM58CP-201ENST00000435741 640 ntBASIC15.67■□□□□ 0.1
PCDH1Q08174 AP000347.1-202ENST00000435868 847 ntBASIC15.67■□□□□ 0.1
PCDH1Q08174 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.67■□□□□ 0.1
PCDH1Q08174 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH1Q08174 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDH1Q08174 KRT8P23-201ENST00000560090 1207 ntBASIC15.67■□□□□ 0.1
PCDH1Q08174 AC061975.2-201ENST00000581722 295 ntBASIC15.67■□□□□ 0.1
PCDH1Q08174 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDH1Q08174 MTDHP5-201ENST00000598980 586 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms