Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
IRX3P78415 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
IRX3P78415 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
IRX3P78415 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 AL391256.1-201ENST00000443260 1855 ntBASIC18.92■□□□□ 0.62
IRX3P78415 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
IRX3P78415 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.92■□□□□ 0.62
IRX3P78415 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX3P78415 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
IRX3P78415 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX3P78415 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 AL589702.1-201ENST00000641229 1509 ntBASIC18.91■□□□□ 0.62
IRX3P78415 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
IRX3P78415 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 AL512384.1-201ENST00000406683 331 ntBASIC18.91■□□□□ 0.62
IRX3P78415 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.91■□□□□ 0.62
IRX3P78415 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 AP002490.2-201ENST00000524791 560 ntBASIC18.91■□□□□ 0.62
IRX3P78415 HILS1-202ENST00000545329 423 ntBASIC18.91■□□□□ 0.62
IRX3P78415 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 AC007431.3-201ENST00000623221 587 ntBASIC18.91■□□□□ 0.62
IRX3P78415 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX3P78415 AL139011.1-202ENST00000642063 584 ntBASIC18.91■□□□□ 0.62
IRX3P78415 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX3P78415 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
IRX3P78415 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.91■□□□□ 0.62
IRX3P78415 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
IRX3P78415 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC18.91■□□□□ 0.62
IRX3P78415 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IRX3P78415 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.9■□□□□ 0.62
IRX3P78415 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
IRX3P78415 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
IRX3P78415 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
IRX3P78415 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 SPDYE18-201ENST00000510091 1050 ntBASIC18.9■□□□□ 0.62
IRX3P78415 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.9■□□□□ 0.62
IRX3P78415 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.9■□□□□ 0.62
IRX3P78415 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 WASH4P-201ENST00000564273 1246 ntBASIC18.9■□□□□ 0.62
IRX3P78415 CHCHD2P3-201ENST00000603038 451 ntBASIC18.9■□□□□ 0.62
IRX3P78415 AC004790.1-201ENST00000612686 536 ntBASIC18.9■□□□□ 0.62
IRX3P78415 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.9■□□□□ 0.62
IRX3P78415 AL033527.5-202ENST00000641632 1098 ntBASIC18.9■□□□□ 0.62
IRX3P78415 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.9■□□□□ 0.62
IRX3P78415 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.9■□□□□ 0.62
IRX3P78415 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.9■□□□□ 0.62
IRX3P78415 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX3P78415 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms