Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 MKNK2P1-201ENST00000437526 628 ntBASIC14.21□□□□□ -0.13
HIST1H3AP68431 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 RN7SL589P-201ENST00000481268 310 ntBASIC14.21□□□□□ -0.13
HIST1H3AP68431 POLD2P1-201ENST00000511220 997 ntBASIC14.21□□□□□ -0.13
HIST1H3AP68431 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 AC243562.1-201ENST00000560672 389 ntBASIC14.21□□□□□ -0.13
HIST1H3AP68431 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 AC027307.2-201ENST00000591252 911 ntBASIC14.21□□□□□ -0.13
HIST1H3AP68431 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.21□□□□□ -0.13
HIST1H3AP68431 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H3AP68431 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H3AP68431 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
HIST1H3AP68431 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H3AP68431 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
HIST1H3AP68431 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.21□□□□□ -0.14
HIST1H3AP68431 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H3AP68431 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H3AP68431 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 OVCH1-AS1-204ENST00000641955 5529 ntBASIC14.2□□□□□ -0.14
HIST1H3AP68431 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 AP005117.1-202ENST00000581724 1908 ntBASIC14.2□□□□□ -0.14
HIST1H3AP68431 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.2□□□□□ -0.14
HIST1H3AP68431 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 AC142381.1-201ENST00000426099 345 ntBASIC14.2□□□□□ -0.14
HIST1H3AP68431 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 LINC01225-203ENST00000563550 1244 ntBASIC14.2□□□□□ -0.14
HIST1H3AP68431 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 AC061975.2-201ENST00000581722 295 ntBASIC14.2□□□□□ -0.14
HIST1H3AP68431 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 MTDHP5-201ENST00000598980 586 ntBASIC14.2□□□□□ -0.14
HIST1H3AP68431 AC026120.1-201ENST00000611536 926 ntBASIC14.2□□□□□ -0.14
HIST1H3AP68431 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST1H3AP68431 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H3AP68431 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 YBX2P1-201ENST00000394192 760 ntBASIC14.19□□□□□ -0.14
HIST1H3AP68431 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 AC024267.1-201ENST00000582320 895 ntBASIC14.19□□□□□ -0.14
HIST1H3AP68431 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 AC084121.4-201ENST00000641598 221 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms