Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CDH13P55290 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH13P55290 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.94■□□□□ 0.14
CDH13P55290 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 AL513477.1-201ENST00000602865 2407 ntBASIC15.94■□□□□ 0.14
CDH13P55290 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CDH13P55290 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
CDH13P55290 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.94■□□□□ 0.14
CDH13P55290 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH13P55290 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.93■□□□□ 0.14
CDH13P55290 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC15.93■□□□□ 0.14
CDH13P55290 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.93■□□□□ 0.14
CDH13P55290 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CDH13P55290 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.93■□□□□ 0.14
CDH13P55290 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CDH13P55290 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.93■□□□□ 0.14
CDH13P55290 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.93■□□□□ 0.14
CDH13P55290 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CDH13P55290 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.93■□□□□ 0.14
CDH13P55290 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH13P55290 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH13P55290 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH13P55290 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CDH13P55290 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH13P55290 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.92■□□□□ 0.14
CDH13P55290 IGHV3-22-201ENST00000520721 359 ntBASIC15.92■□□□□ 0.14
CDH13P55290 AC096734.2-201ENST00000562054 433 ntBASIC15.92■□□□□ 0.14
CDH13P55290 AP001005.1-201ENST00000571755 1248 ntBASIC15.92■□□□□ 0.14
CDH13P55290 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.92■□□□□ 0.14
CDH13P55290 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.92■□□□□ 0.14
CDH13P55290 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.92■□□□□ 0.14
CDH13P55290 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH13P55290 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH13P55290 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH13P55290 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CDH13P55290 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.92■□□□□ 0.14
CDH13P55290 NORAD-201ENST00000565493 5339 ntBASIC15.92■□□□□ 0.14
CDH13P55290 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CDH13P55290 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CDH13P55290 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms