Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 TREML5P-201ENST00000421694 576 ntBASIC18.3■□□□□ 0.52
USP11P51784 AC092580.3-201ENST00000430932 139 ntBASIC18.3■□□□□ 0.52
USP11P51784 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.3■□□□□ 0.52
USP11P51784 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.3■□□□□ 0.52
USP11P51784 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.3■□□□□ 0.52
USP11P51784 AL138828.2-201ENST00000615812 383 ntBASIC18.3■□□□□ 0.52
USP11P51784 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.3■□□□□ 0.52
USP11P51784 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
USP11P51784 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.3■□□□□ 0.52
USP11P51784 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP11P51784 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USP11P51784 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.29■□□□□ 0.52
USP11P51784 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.29■□□□□ 0.52
USP11P51784 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
USP11P51784 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.29■□□□□ 0.52
USP11P51784 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USP11P51784 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 RPL37AP1-201ENST00000412502 279 ntBASIC18.29■□□□□ 0.52
USP11P51784 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.29■□□□□ 0.52
USP11P51784 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.29■□□□□ 0.52
USP11P51784 AC027369.6-201ENST00000525520 931 ntBASIC18.29■□□□□ 0.52
USP11P51784 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.29■□□□□ 0.52
USP11P51784 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.29■□□□□ 0.52
USP11P51784 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
USP11P51784 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.29■□□□□ 0.52
USP11P51784 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
USP11P51784 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP11P51784 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
USP11P51784 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
USP11P51784 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.29■□□□□ 0.52
USP11P51784 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP11P51784 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
USP11P51784 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18.28■□□□□ 0.52
USP11P51784 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.28■□□□□ 0.52
USP11P51784 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP11P51784 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.28■□□□□ 0.52
USP11P51784 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.28■□□□□ 0.52
USP11P51784 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.28■□□□□ 0.52
USP11P51784 EEF1DP4-201ENST00000446006 880 ntBASIC18.28■□□□□ 0.52
USP11P51784 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
USP11P51784 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.28■□□□□ 0.52
USP11P51784 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.28■□□□□ 0.52
USP11P51784 AL390955.2-201ENST00000603032 514 ntBASIC18.28■□□□□ 0.52
USP11P51784 SPDYE12P-201ENST00000618416 771 ntBASIC18.28■□□□□ 0.52
USP11P51784 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
USP11P51784 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
USP11P51784 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.28■□□□□ 0.52
USP11P51784 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.28■□□□□ 0.52
USP11P51784 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
USP11P51784 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
USP11P51784 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP11P51784 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.27■□□□□ 0.52
USP11P51784 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
USP11P51784 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP11P51784 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP11P51784 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP11P51784 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
USP11P51784 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.27■□□□□ 0.52
USP11P51784 BNIP3P1-202ENST00000550043 1585 ntBASIC18.27■□□□□ 0.52
USP11P51784 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP11P51784 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.27■□□□□ 0.52
USP11P51784 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
USP11P51784 FO393414.2-201ENST00000405153 598 ntBASIC18.27■□□□□ 0.52
USP11P51784 AL080243.2-201ENST00000418783 582 ntBASIC18.27■□□□□ 0.52
USP11P51784 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
USP11P51784 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.27■□□□□ 0.52
USP11P51784 AL590560.3-201ENST00000623350 461 ntBASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms