Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF144AP50876 MTHFR-217ENST00000641820 1569 ntBASIC15.18■□□□□ 0.02
RNF144AP50876 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
RNF144AP50876 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RNF144AP50876 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF144AP50876 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.18■□□□□ 0.02
RNF144AP50876 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RNF144AP50876 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF144AP50876 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF144AP50876 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF144AP50876 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF144AP50876 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RNF144AP50876 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF144AP50876 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF144AP50876 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF144AP50876 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.17■□□□□ 0.02
RNF144AP50876 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RNF144AP50876 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RNF144AP50876 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF144AP50876 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF144AP50876 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF144AP50876 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RNF144AP50876 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF144AP50876 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RNF144AP50876 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF144AP50876 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.17■□□□□ 0.02
RNF144AP50876 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.17■□□□□ 0.02
RNF144AP50876 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 AC024909.3-201ENST00000611513 2257 ntBASIC15.17■□□□□ 0.02
RNF144AP50876 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RNF144AP50876 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF144AP50876 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF144AP50876 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RNF144AP50876 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNF144AP50876 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF144AP50876 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 AC140658.5-201ENST00000438532 169 ntBASIC15.16■□□□□ 0.02
RNF144AP50876 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 AC090142.2-201ENST00000483263 416 ntBASIC15.16■□□□□ 0.02
RNF144AP50876 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF144AP50876 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF144AP50876 AP002472.1-201ENST00000577490 586 ntBASIC15.16■□□□□ 0.02
RNF144AP50876 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.16■□□□□ 0.02
RNF144AP50876 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF144AP50876 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF144AP50876 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF144AP50876 AC021097.1-201ENST00000607902 574 ntBASIC15.16■□□□□ 0.02
RNF144AP50876 FAM197Y3-203ENST00000618346 717 ntBASIC15.16■□□□□ 0.02
RNF144AP50876 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF144AP50876 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNF144AP50876 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF144AP50876 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF144AP50876 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RNF144AP50876 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms