Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.88■□□□□ 0.45
HTTP42858 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.88■□□□□ 0.45
HTTP42858 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.88■□□□□ 0.45
HTTP42858 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.88■□□□□ 0.45
HTTP42858 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.88■□□□□ 0.45
HTTP42858 HSPB1P2-201ENST00000448722 546 ntBASIC17.88■□□□□ 0.45
HTTP42858 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.88■□□□□ 0.45
HTTP42858 PRKXP1-201ENST00000561423 1122 ntBASIC17.88■□□□□ 0.45
HTTP42858 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.88■□□□□ 0.45
HTTP42858 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.88■□□□□ 0.45
HTTP42858 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.88■□□□□ 0.45
HTTP42858 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.88■□□□□ 0.45
HTTP42858 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HTTP42858 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.88■□□□□ 0.45
HTTP42858 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
HTTP42858 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.88■□□□□ 0.45
HTTP42858 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.88■□□□□ 0.45
HTTP42858 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
HTTP42858 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
HTTP42858 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 PARVG-202ENST00000415224 999 ntTSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.87■□□□□ 0.45
HTTP42858 ECM1P1-201ENST00000604092 1279 ntBASIC17.87■□□□□ 0.45
HTTP42858 AC060834.1-201ENST00000443027 2032 ntBASIC17.87■□□□□ 0.45
HTTP42858 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.87■□□□□ 0.45
HTTP42858 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 AC120498.9-201ENST00000339021 3867 ntBASIC17.87■□□□□ 0.45
HTTP42858 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.87■□□□□ 0.45
HTTP42858 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 DRD5P1-201ENST00000456605 1438 ntBASIC17.87■□□□□ 0.45
HTTP42858 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 AC234644.1-201ENST00000406065 370 ntBASIC17.87■□□□□ 0.45
HTTP42858 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 CYP46A4P-201ENST00000414953 267 ntBASIC17.87■□□□□ 0.45
HTTP42858 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.87■□□□□ 0.45
HTTP42858 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.87■□□□□ 0.45
HTTP42858 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HTTP42858 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
HTTP42858 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HTTP42858 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
HTTP42858 AC016396.2-201ENST00000562575 1417 ntBASIC17.87■□□□□ 0.45
HTTP42858 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.87■□□□□ 0.45
HTTP42858 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.87■□□□□ 0.45
HTTP42858 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.87■□□□□ 0.45
HTTP42858 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.86■□□□□ 0.45
HTTP42858 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 AC006480.2-201ENST00000609770 1337 ntBASIC17.86■□□□□ 0.45
HTTP42858 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.86■□□□□ 0.45
HTTP42858 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
HTTP42858 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC17.86■□□□□ 0.45
HTTP42858 POM121L10P-201ENST00000436994 1285 ntBASIC17.86■□□□□ 0.45
HTTP42858 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.86■□□□□ 0.45
HTTP42858 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC17.86■□□□□ 0.45
HTTP42858 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.86■□□□□ 0.45
HTTP42858 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.86■□□□□ 0.45
HTTP42858 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.86■□□□□ 0.45
HTTP42858 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC17.86■□□□□ 0.45
HTTP42858 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
HTTP42858 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HTTP42858 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.86■□□□□ 0.45
HTTP42858 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HTTP42858 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms